Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcription factor (S1Fa)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Oryza alta GWHAZTO00000004 1 CH_oal_531 2 2 0.000120908
Oryza alta GWHAZTO00000016 1 CH_oal_532 2 2 0.000120908
Oryza brachyantha 4 1 CH_obr_188 2 2 0.0000597336
Oryza sativa ssp. indica Chr4 1 CH_osaindica_236 2 2 0.0000516609
Oryza sativa Kitaake Chr4 1 CH_osak_315 2 2 0.0000562857
Oryza sativa ssp. japonica chr04 1 CH_osa_260 2 3 0.000158433
Oryza alta GWHAZTO00000004 2 CH_oal_531 2 2 0.000120908
Oryza alta GWHAZTO00000016 2 CH_oal_532 2 2 0.000120908
Oryza brachyantha 4 2 CH_obr_188 2 2 0.0000597336
Oryza sativa ssp. indica Chr4 2 CH_osaindica_236 2 2 0.0000516609
Oryza sativa Kitaake Chr4 2 CH_osak_315 2 2 0.0000562857
Oryza sativa ssp. japonica chr04 2 CH_osa_260 2 3 0.000158433

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001