Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Eragrostis curvula | 5 | 1 | CH_ecu_249 | 4 | 10 | 0.0000000500695 |
| Miscanthus sinensis | Chr01 | 1 | CH_msi_230 | 4 | 19 | 0.00000282909 |
| Phyllostachys edulis | hic_scaffold_15 | 1 | CH_ped_218 | 3 | 3 | 0.00000572783 |
| Triticum aestivum | Chr4A | 1 | CH_tae_351 | 4 | 4 | 0.00000000115684 |
| Triticum aestivum | Chr4D | 1 | CH_tae_879 | 3 | 4 | 0.0000149879 |
| Triticum turgidum | chr4A | 1 | CH_ttu_330 | 3 | 3 | 0.00000225639 |
| Eragrostis curvula | 5 | 2 | CH_ecu_249 | 4 | 10 | 0.0000000500695 |
| Miscanthus sinensis | Chr01 | 2 | CH_msi_230 | 4 | 19 | 0.00000282909 |
| Phyllostachys edulis | hic_scaffold_15 | 2 | CH_ped_218 | 3 | 3 | 0.00000572783 |
| Triticum aestivum | Chr4A | 2 | CH_tae_351 | 4 | 4 | 0.00000000115684 |
| Triticum aestivum | Chr4D | 2 | CH_tae_879 | 3 | 4 | 0.0000149879 |
| Triticum turgidum | chr4A | 2 | CH_ttu_330 | 3 | 3 | 0.00000225639 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |