Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.transcription factor (HSF)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Secale cereale | GWHASIY00000005 | 1 | CH_sce_257 | 5 | 25 | 0.000000287973 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_14 | 12 | 17 | 9.85753e-35 |
| Triticum aestivum | Chr4B | 1 | CH_tae_966 | 3 | 3 | 0.0000369013 |
| Triticum dicoccoides | 3B | 1 | CH_tdi_331 | 3 | 3 | 0.0000140906 |
| Triticum turgidum | chr3B | 1 | CH_ttu_460 | 3 | 3 | 0.0000384392 |
| Triticum turgidum | chr4B | 1 | CH_ttu_578 | 4 | 22 | 0.000225822 |
| Secale cereale | GWHASIY00000005 | 2 | CH_sce_257 | 5 | 25 | 0.000000287973 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_14 | 12 | 17 | 9.85753e-35 |
| Triticum aestivum | Chr4B | 2 | CH_tae_966 | 3 | 3 | 0.0000369013 |
| Triticum dicoccoides | 3B | 2 | CH_tdi_331 | 3 | 3 | 0.0000140906 |
| Triticum turgidum | chr3B | 2 | CH_ttu_460 | 3 | 3 | 0.0000384392 |
| Triticum turgidum | chr4B | 2 | CH_ttu_578 | 4 | 22 | 0.000225822 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |