Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd3 1 CH_bdi_351 2 2 0.000925012
Digitaria exilis Dexi_CM05836_chr04B 1 CH_dex_616 2 2 0.000501303
Eragrostis curvula 5 1 CH_ecu_381 4 58 0.0000025875
Oryza alta GWHAZTO00000003 1 CH_oal_770 2 2 0.000725448
Solanum lycopersicum SL4.0ch01 1 CH_sly_462 2 2 0.000352164
Spirodela polyrhiza pseudo0 1 CH_spo_231 2 3 0.000917213
Brachypodium distachyon Bd3 2 CH_bdi_351 2 2 0.000925012
Digitaria exilis Dexi_CM05836_chr04B 2 CH_dex_616 2 2 0.000501303
Eragrostis curvula 5 2 CH_ecu_381 4 58 0.0000025875
Oryza alta GWHAZTO00000003 2 CH_oal_770 2 2 0.000725448
Solanum lycopersicum SL4.0ch01 2 CH_sly_462 2 2 0.000352164
Spirodela polyrhiza pseudo0 2 CH_spo_231 2 3 0.000917213

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001