Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT6-IWS1 transcription elongation complex.component IWS1
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Asparagus officinalis | AsparagusV1_07 | 1 | CH_aof_69 | 2 | 2 | 0.0000755915 |
Calamus simplicifolius | scaffold684 | 1 | CH_calsi_207 | 2 | 3 | 0.00020139 |
Physcomitrium patens | Chr07 | 1 | CH_ppa_82 | 2 | 2 | 0.0000612726 |
Sequoiadendron giganteum | chr7 | 1 | CH_sgi_439 | 3 | 4 | 0.000000014239 |
Saccharum spontaneum | Chr3C | 1 | CH_ssp_1217 | 2 | 5 | 0.000715726 |
Asparagus officinalis | AsparagusV1_07 | 2 | CH_aof_69 | 2 | 2 | 0.0000755915 |
Calamus simplicifolius | scaffold684 | 2 | CH_calsi_207 | 2 | 3 | 0.00020139 |
Physcomitrium patens | Chr07 | 2 | CH_ppa_82 | 2 | 2 | 0.0000612726 |
Sequoiadendron giganteum | chr7 | 2 | CH_sgi_439 | 3 | 4 | 0.000000014239 |
Saccharum spontaneum | Chr3C | 2 | CH_ssp_1217 | 2 | 5 | 0.000715726 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |