Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED5/MED24/MED33

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_05 1 CH_aof_115 2 2 0.000226775
Allium sativum chr7_1 1 CH_asa_709 2 2 0.000387537
Allium sativum chr2 1 CH_asa_710 2 2 0.000387537
Magnolia biondii Chr03 1 CH_mbi_193 3 7 0.000000495247
Sequoiadendron giganteum chr1 1 CH_sgi_172 5 10 0.0000000000000106446
Spirodela polyrhiza pseudo3 1 CH_spo_173 2 2 0.000305764
Vanilla planifolia CM028154.1 1 CH_vpl_15 4 4 0.00000000000121029
Asparagus officinalis AsparagusV1_05 2 CH_aof_115 2 2 0.000226775
Allium sativum chr7_1 2 CH_asa_709 2 2 0.000387537
Allium sativum chr2 2 CH_asa_710 2 2 0.000387537
Magnolia biondii Chr03 2 CH_mbi_193 3 7 0.000000495247
Sequoiadendron giganteum chr1 2 CH_sgi_172 5 10 0.0000000000000106446
Spirodela polyrhiza pseudo3 2 CH_spo_173 2 2 0.000305764
Vanilla planifolia CM028154.1 2 CH_vpl_15 4 4 0.00000000000121029

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001