Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_42 3 4 0.0000021639
Asparagus officinalis AsparagusV1_04 1 CH_aof_68 2 2 0.0000755915
Eragrostis curvula Contig8 1 CH_ecu_167 4 21 0.00000000104629
Musa acuminata chrUn_random 1 CH_mac_142 2 2 0.000170455
Panicum hallii Chr05 1 CH_pha_81 4 14 0.00000000294515
Physcomitrium patens Chr26 1 CH_ppa_129 2 3 0.000183812
Saccharum spontaneum Chr7B 1 CH_ssp_666 2 2 0.0000715768
Zoysia japonica ssp. nagirizaki Zjn_sc00040.1 1 CH_zjn_197 2 5 0.000369932
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_42 3 4 0.0000021639
Asparagus officinalis AsparagusV1_04 2 CH_aof_68 2 2 0.0000755915
Eragrostis curvula Contig8 2 CH_ecu_167 4 21 0.00000000104629
Musa acuminata chrUn_random 2 CH_mac_142 2 2 0.000170455
Panicum hallii Chr05 2 CH_pha_81 4 14 0.00000000294515
Physcomitrium patens Chr26 2 CH_ppa_129 2 3 0.000183812
Saccharum spontaneum Chr7B 2 CH_ssp_666 2 2 0.0000715768
Zoysia japonica ssp. nagirizaki Zjn_sc00040.1 2 CH_zjn_197 2 5 0.000369932

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001