Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Digitaria exilis Dexi_CM05836_chr09B 1 CH_dex_149 3 3 0.000000016754
Eragrostis curvula 2 1 CH_ecu_415 3 8 0.00000706842
Oryza sativa ssp. indica Chr11 1 CH_osaindica_321 2 2 0.000309965
Oryza sativa Kitaake Chr11 1 CH_osak_403 2 2 0.000337714
Oryza sativa ssp. japonica chr11 1 CH_osa_363 2 2 0.000528123
Panicum hallii Chr08 1 CH_pha_298 2 2 0.000174332
Zostera marina Chr02 1 CH_zosmarina_166 2 2 0.000289673
Digitaria exilis Dexi_CM05836_chr09B 2 CH_dex_149 3 3 0.000000016754
Eragrostis curvula 2 2 CH_ecu_415 3 8 0.00000706842
Oryza sativa ssp. indica Chr11 2 CH_osaindica_321 2 2 0.000309965
Oryza sativa Kitaake Chr11 2 CH_osak_403 2 2 0.000337714
Oryza sativa ssp. japonica chr11 2 CH_osa_363 2 2 0.000528123
Panicum hallii Chr08 2 CH_pha_298 2 2 0.000174332
Zostera marina Chr02 2 CH_zosmarina_166 2 2 0.000289673

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001