Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 1D 1 CH_ata_289 2 3 0.000443157
Elaeis guineensis EG5.1_Chr3 1 CH_egu_277 2 2 0.000568397
Phyllostachys edulis hic_scaffold_18 1 CH_ped_312 3 25 0.00011439
Physcomitrium patens Chr19 1 CH_ppa_175 2 2 0.000183818
Populus trichocarpa Chr10 1 CH_ptr_444 2 2 0.000346801
Secale cereale GWHASIY00000001 1 CH_sce_304 3 6 0.00000124349
Solanum lycopersicum SL4.0ch06 1 CH_sly_83 4 4 0.0000000000424659
Triticum aestivum Chr1B 1 CH_tae_1315 2 2 0.000523785
Triticum dicoccoides 1A 1 CH_tdi_532 2 2 0.000445276
Triticum dicoccoides 1B 1 CH_tdi_533 2 2 0.000445276
Triticum turgidum chr1B 1 CH_ttu_741 2 3 0.000937559
Aegilops tauschii 1D 2 CH_ata_289 2 3 0.000443157
Elaeis guineensis EG5.1_Chr3 2 CH_egu_277 2 2 0.000568397
Phyllostachys edulis hic_scaffold_18 2 CH_ped_312 3 25 0.00011439
Physcomitrium patens Chr19 2 CH_ppa_175 2 2 0.000183818
Populus trichocarpa Chr10 2 CH_ptr_444 2 2 0.000346801
Secale cereale GWHASIY00000001 2 CH_sce_304 3 6 0.00000124349
Solanum lycopersicum SL4.0ch06 2 CH_sly_83 4 4 0.0000000000424659
Triticum aestivum Chr1B 2 CH_tae_1315 2 2 0.000523785
Triticum dicoccoides 1A 2 CH_tdi_532 2 2 0.000445276
Triticum dicoccoides 1B 2 CH_tdi_533 2 2 0.000445276
Triticum turgidum chr1B 2 CH_ttu_741 2 3 0.000937559

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001