Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG12 1 CH_aco_140 2 2 0.000497678
Allium sativum chr6 1 CH_asa_740 2 2 0.000387537
Elaeis guineensis EG5.1_Chr5 1 CH_egu_321 2 2 0.000947329
Secale cereale GWHASIY00000002 1 CH_sce_129 4 8 0.000000000693503
Triticum aestivum Chr2B 1 CH_tae_614 3 3 0.000000428328
Triticum aestivum Chr2A 1 CH_tae_615 3 3 0.000000428328
Triticum aestivum Chr2D 1 CH_tae_616 3 3 0.000000428328
Triticum turgidum chr2B 1 CH_ttu_244 3 3 0.000000241756
Zoysia japonica ssp. nagirizaki Zjn_sc00097.1 1 CH_zjn_218 2 2 0.000554929
Ananas comosus LG12 2 CH_aco_140 2 2 0.000497678
Allium sativum chr6 2 CH_asa_740 2 2 0.000387537
Elaeis guineensis EG5.1_Chr5 2 CH_egu_321 2 2 0.000947329
Secale cereale GWHASIY00000002 2 CH_sce_129 4 8 0.000000000693503
Triticum aestivum Chr2B 2 CH_tae_614 3 3 0.000000428328
Triticum aestivum Chr2A 2 CH_tae_615 3 3 0.000000428328
Triticum aestivum Chr2D 2 CH_tae_616 3 3 0.000000428328
Triticum turgidum chr2B 2 CH_ttu_244 3 3 0.000000241756
Zoysia japonica ssp. nagirizaki Zjn_sc00097.1 2 CH_zjn_218 2 2 0.000554929

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001