Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 5
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Ananas comosus | LG12 | 1 | CH_aco_140 | 2 | 2 | 0.000497678 |
Allium sativum | chr6 | 1 | CH_asa_740 | 2 | 2 | 0.000387537 |
Elaeis guineensis | EG5.1_Chr5 | 1 | CH_egu_321 | 2 | 2 | 0.000947329 |
Secale cereale | GWHASIY00000002 | 1 | CH_sce_129 | 4 | 8 | 0.000000000693503 |
Triticum aestivum | Chr2B | 1 | CH_tae_614 | 3 | 3 | 0.000000428328 |
Triticum aestivum | Chr2A | 1 | CH_tae_615 | 3 | 3 | 0.000000428328 |
Triticum aestivum | Chr2D | 1 | CH_tae_616 | 3 | 3 | 0.000000428328 |
Triticum turgidum | chr2B | 1 | CH_ttu_244 | 3 | 3 | 0.000000241756 |
Zoysia japonica ssp. nagirizaki | Zjn_sc00097.1 | 1 | CH_zjn_218 | 2 | 2 | 0.000554929 |
Ananas comosus | LG12 | 2 | CH_aco_140 | 2 | 2 | 0.000497678 |
Allium sativum | chr6 | 2 | CH_asa_740 | 2 | 2 | 0.000387537 |
Elaeis guineensis | EG5.1_Chr5 | 2 | CH_egu_321 | 2 | 2 | 0.000947329 |
Secale cereale | GWHASIY00000002 | 2 | CH_sce_129 | 4 | 8 | 0.000000000693503 |
Triticum aestivum | Chr2B | 2 | CH_tae_614 | 3 | 3 | 0.000000428328 |
Triticum aestivum | Chr2A | 2 | CH_tae_615 | 3 | 3 | 0.000000428328 |
Triticum aestivum | Chr2D | 2 | CH_tae_616 | 3 | 3 | 0.000000428328 |
Triticum turgidum | chr2B | 2 | CH_ttu_244 | 3 | 3 | 0.000000241756 |
Zoysia japonica ssp. nagirizaki | Zjn_sc00097.1 | 2 | CH_zjn_218 | 2 | 2 | 0.000554929 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |