Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component EME1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 2D 1 CH_ata_259 2 4 0.000295436
Brachypodium distachyon Bd5 1 CH_bdi_180 2 2 0.0000616675
Hordeum vulgare chr2H 1 CH_hvu_310 2 3 0.000121748
Secale cereale GWHASIY00000002 1 CH_sce_927 2 3 0.000819479
Triticum aestivum Chr2D 1 CH_tae_1187 2 2 0.000280599
Triticum aestivum Chr2B 1 CH_tae_1440 2 3 0.000841769
Triticum aestivum Chr2A 1 CH_tae_1441 2 3 0.000841769
Triticum dicoccoides 2B 1 CH_tdi_444 2 2 0.00017811
Triticum dicoccoides 2A 1 CH_tdi_548 2 3 0.000534312
Triticum turgidum chr2A 1 CH_ttu_540 2 2 0.000187521
Triticum turgidum chr2B 1 CH_ttu_541 2 2 0.000187521
Aegilops tauschii 2D 2 CH_ata_259 2 4 0.000295436
Brachypodium distachyon Bd5 2 CH_bdi_180 2 2 0.0000616675
Hordeum vulgare chr2H 2 CH_hvu_310 2 3 0.000121748
Secale cereale GWHASIY00000002 2 CH_sce_927 2 3 0.000819479
Triticum aestivum Chr2D 2 CH_tae_1187 2 2 0.000280599
Triticum aestivum Chr2B 2 CH_tae_1440 2 3 0.000841769
Triticum aestivum Chr2A 2 CH_tae_1441 2 3 0.000841769
Triticum dicoccoides 2B 2 CH_tdi_444 2 2 0.00017811
Triticum dicoccoides 2A 2 CH_tdi_548 2 3 0.000534312
Triticum turgidum chr2A 2 CH_ttu_540 2 2 0.000187521
Triticum turgidum chr2B 2 CH_ttu_541 2 2 0.000187521

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001