Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.regulatory protein for RAD50 nuclear import (PHS1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 7D 1 CH_ata_324 2 6 0.000738552
Amborella trichopoda AmTr_v1.0_scaffold00083 1 CH_atr_322 2 5 0.000794313
Hordeum vulgare chr7H 1 CH_hvu_349 2 4 0.000243492
Lolium perenne Lp_chr7_0.1 1 CH_lpe_266 2 3 0.0000964258
Triticum aestivum Chr7A 1 CH_tae_1448 2 3 0.000841769
Triticum turgidum chr7A 1 CH_ttu_590 2 3 0.000281273
Aegilops tauschii 7D 2 CH_ata_324 2 6 0.000738552
Amborella trichopoda AmTr_v1.0_scaffold00083 2 CH_atr_322 2 5 0.000794313
Hordeum vulgare chr7H 2 CH_hvu_349 2 4 0.000243492
Lolium perenne Lp_chr7_0.1 2 CH_lpe_266 2 3 0.0000964258
Triticum aestivum Chr7A 2 CH_tae_1448 2 3 0.000841769
Triticum turgidum chr7A 2 CH_ttu_590 2 3 0.000281273

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001