Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin dissociation.separase (ESP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_05 1 CH_aof_125 2 2 0.000226775
Amborella trichopoda AmTr_v1.0_scaffold00001 1 CH_atr_234 2 3 0.000238313
Musa acuminata chr09 1 CH_mac_113 2 2 0.0000568182
Secale cereale GWHASIY00000002 1 CH_sce_777 2 3 0.000409746
Sequoiadendron giganteum chr2 1 CH_sgi_1360 2 2 0.000730727
Sequoiadendron giganteum chr2 1 CH_sgi_512 3 3 0.0000000711967
Saccharum spontaneum Chr4A 1 CH_ssp_1119 2 2 0.000501038
Asparagus officinalis AsparagusV1_05 2 CH_aof_125 2 2 0.000226775
Amborella trichopoda AmTr_v1.0_scaffold00001 2 CH_atr_234 2 3 0.000238313
Musa acuminata chr09 2 CH_mac_113 2 2 0.0000568182
Secale cereale GWHASIY00000002 2 CH_sce_777 2 3 0.000409746
Sequoiadendron giganteum chr2 2 CH_sgi_1360 2 2 0.000730727
Sequoiadendron giganteum chr2 2 CH_sgi_512 3 3 0.0000000711967
Saccharum spontaneum Chr4A 2 CH_ssp_1119 2 2 0.000501038

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001