Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CRA complex.component ARID5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 4 1 CH_cde_161 2 2 0.000236939
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_472 3 13 0.0000081956
Oryza alta GWHAZTO00000020 1 CH_oal_14 6 9 2.90133e-18
Oryza alta GWHAZTO00000008 1 CH_oal_255 3 6 0.00000200967
Oryza sativa Kitaake Chr8 1 CH_osak_197 3 5 0.000000475159
Oryza sativa ssp. japonica chr08 1 CH_osa_100 3 3 0.0000000836762
Oryza sativa ssp. japonica chr09 1 CH_osa_382 2 2 0.000792184
Saccharum spontaneum Chr1A 1 CH_ssp_209 3 3 0.0000000717263
Ceratophyllum demersum 4 2 CH_cde_161 2 2 0.000236939
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_472 3 13 0.0000081956
Oryza alta GWHAZTO00000020 2 CH_oal_14 6 9 2.90133e-18
Oryza alta GWHAZTO00000008 2 CH_oal_255 3 6 0.00000200967
Oryza sativa Kitaake Chr8 2 CH_osak_197 3 5 0.000000475159
Oryza sativa ssp. japonica chr08 2 CH_osa_100 3 3 0.0000000836762
Oryza sativa ssp. japonica chr09 2 CH_osa_382 2 2 0.000792184
Saccharum spontaneum Chr1A 2 CH_ssp_209 3 3 0.0000000717263

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001