Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CRA complex.component RINGLET/RLT

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr8 1 CH_asa_720 2 2 0.000387537
Allium sativum chr8 1 CH_asa_721 2 2 0.000387537
Cenchrus purpureus GWHAORA00000007 1 CH_cpu_727 2 2 0.000309138
Miscanthus sinensis Chr05 1 CH_msi_499 2 2 0.000321989
Oryza brachyantha 1 1 CH_obr_249 2 4 0.00035838
Phyllostachys edulis hic_scaffold_7 1 CH_ped_378 2 2 0.000244474
Physcomitrium patens Chr16 1 CH_ppa_80 2 2 0.0000612726
Sorghum bicolor Chr03 1 CH_sbi_269 2 2 0.0000586682
Secale cereale GWHASIY00000003 1 CH_sce_713 2 2 0.000273174
Sequoiadendron giganteum chr8 1 CH_sgi_784 2 2 0.0000487151
Selaginella moellendorffii scaffold_59 1 CH_smo_116 2 2 0.000280112
Vanilla planifolia CM028161.1 1 CH_vpl_52 4 45 0.000000180055
Zea mays B73 3 1 CH_zma_78 3 4 0.000000313711
Allium sativum chr8 2 CH_asa_720 2 2 0.000387537
Allium sativum chr8 2 CH_asa_721 2 2 0.000387537
Cenchrus purpureus GWHAORA00000007 2 CH_cpu_727 2 2 0.000309138
Miscanthus sinensis Chr05 2 CH_msi_499 2 2 0.000321989
Oryza brachyantha 1 2 CH_obr_249 2 4 0.00035838
Phyllostachys edulis hic_scaffold_7 2 CH_ped_378 2 2 0.000244474
Physcomitrium patens Chr16 2 CH_ppa_80 2 2 0.0000612726
Sorghum bicolor Chr03 2 CH_sbi_269 2 2 0.0000586682
Secale cereale GWHASIY00000003 2 CH_sce_713 2 2 0.000273174
Sequoiadendron giganteum chr8 2 CH_sgi_784 2 2 0.0000487151
Selaginella moellendorffii scaffold_59 2 CH_smo_116 2 2 0.000280112
Vanilla planifolia CM028161.1 2 CH_vpl_52 4 45 0.000000180055
Zea mays B73 3 2 CH_zma_78 3 4 0.000000313711

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001