Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr8 1 CH_asa_267 3 3 0.00000218298
Allium sativum chr4 1 CH_asa_439 3 6 0.0000436266
Hordeum vulgare chr7H 1 CH_hvu_210 3 5 0.00000407532
Musa acuminata chr10 1 CH_mac_13 6 7 0.00000000000000506036
Magnolia biondii Chr19 1 CH_mbi_601 2 2 0.000485661
Sorghum bicolor Chr09 1 CH_sbi_107 4 5 0.00000000720726
Secale cereale GWHASIY00000004 1 CH_sce_128 4 4 0.000000000673897
Secale cereale GWHASIY00000004 1 CH_sce_855 3 12 0.000464073
Saccharum spontaneum Chr7D 1 CH_ssp_132 4 4 0.0000000041264
Saccharum spontaneum Chr7A 1 CH_ssp_596 3 4 0.0000363968
Allium sativum chr8 2 CH_asa_267 3 3 0.00000218298
Allium sativum chr4 2 CH_asa_439 3 6 0.0000436266
Hordeum vulgare chr7H 2 CH_hvu_210 3 5 0.00000407532
Musa acuminata chr10 2 CH_mac_13 6 7 0.00000000000000506036
Magnolia biondii Chr19 2 CH_mbi_601 2 2 0.000485661
Sorghum bicolor Chr09 2 CH_sbi_107 4 5 0.00000000720726
Secale cereale GWHASIY00000004 2 CH_sce_128 4 4 0.000000000673897
Secale cereale GWHASIY00000004 2 CH_sce_855 3 12 0.000464073
Saccharum spontaneum Chr7D 2 CH_ssp_132 4 4 0.0000000041264
Saccharum spontaneum Chr7A 2 CH_ssp_596 3 4 0.0000363968

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001