Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.histone H3 demethylase (ICU11/CP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Digitaria exilis Dexi_CM05836_chrUA 1 CH_dex_424 3 34 0.000100126
Eragrostis curvula Contig25 1 CH_ecu_572 2 2 0.000116317
Glycine max Gm10 1 CH_gma_545 2 2 0.000569336
Glycine max Gm20 1 CH_gma_546 2 2 0.000569336
Miscanthus sinensis Chr05 1 CH_msi_303 2 2 0.0000321989
Sequoiadendron giganteum chr10 1 CH_sgi_447 3 3 0.0000000142393
Solanum lycopersicum SL4.0ch04 1 CH_sly_394 2 2 0.000176082
Vanilla planifolia CM028152.1 1 CH_vpl_212 3 42 0.0000938795
Digitaria exilis Dexi_CM05836_chrUA 2 CH_dex_424 3 34 0.000100126
Eragrostis curvula Contig25 2 CH_ecu_572 2 2 0.000116317
Glycine max Gm10 2 CH_gma_545 2 2 0.000569336
Glycine max Gm20 2 CH_gma_546 2 2 0.000569336
Miscanthus sinensis Chr05 2 CH_msi_303 2 2 0.0000321989
Sequoiadendron giganteum chr10 2 CH_sgi_447 3 3 0.0000000142393
Solanum lycopersicum SL4.0ch04 2 CH_sly_394 2 2 0.000176082
Vanilla planifolia CM028152.1 2 CH_vpl_212 3 42 0.0000938795

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001