Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr5 1 CH_ath_341 2 2 0.000286492
Calamus simplicifolius scaffold12 1 CH_calsi_320 2 2 0.000671321
Eragrostis curvula 6 1 CH_ecu_465 3 12 0.0000277586
Oryza brachyantha 5 1 CH_obr_240 3 23 0.000189211
Oryza sativa ssp. indica Chr5 1 CH_osaindica_368 2 2 0.000516609
Oryza sativa Kitaake Chr5 1 CH_osak_447 2 2 0.000562857
Secale cereale GWHASIY00000007 1 CH_sce_958 2 2 0.00095611
Arabidopsis thaliana Chr5 2 CH_ath_341 2 2 0.000286492
Calamus simplicifolius scaffold12 2 CH_calsi_320 2 2 0.000671321
Eragrostis curvula 6 2 CH_ecu_465 3 12 0.0000277586
Oryza brachyantha 5 2 CH_obr_240 3 23 0.000189211
Oryza sativa ssp. indica Chr5 2 CH_osaindica_368 2 2 0.000516609
Oryza sativa Kitaake Chr5 2 CH_osak_447 2 2 0.000562857
Secale cereale GWHASIY00000007 2 CH_sce_958 2 2 0.00095611

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001