Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.chromatin structure.DNA bridging.linker histone (H1)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr6 | 1 | CH_asa_195 | 4 | 7 | 0.000000124988 |
| Allium sativum | chr5 | 1 | CH_asa_31 | 8 | 23 | 6.27013e-17 |
| Allium sativum | chr2 | 1 | CH_asa_4 | 11 | 15 | 8.7268e-30 |
| Aegilops tauschii | 5D | 1 | CH_ata_159 | 3 | 12 | 0.00000799742 |
| Chara braunii | BFEA01000343 | 1 | CH_cbr_114 | 2 | 2 | 0.000215781 |
| Hordeum vulgare | chr5H | 1 | CH_hvu_237 | 3 | 16 | 0.0000138262 |
| Micromonas commoda | Chr_01 | 1 | CH_mco_18 | 2 | 2 | 0.000197961 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_110 | 4 | 4 | 0.000000000140159 |
| Saccharum spontaneum | Chr8A | 1 | CH_ssp_434 | 3 | 6 | 0.00000375605 |
| Triticum aestivum | Chr2A | 1 | CH_tae_341 | 4 | 5 | 0.000000000869386 |
| Triticum aestivum | Chr5B | 1 | CH_tae_465 | 4 | 9 | 0.0000000218952 |
| Triticum aestivum | Chr2D | 1 | CH_tae_669 | 3 | 3 | 0.000000929618 |
| Triticum aestivum | Chr5A | 1 | CH_tae_908 | 3 | 6 | 0.000018584 |
| Triticum aestivum | Chr5D | 1 | CH_tae_987 | 3 | 8 | 0.0000520197 |
| Triticum dicoccoides | 5A | 1 | CH_tdi_275 | 3 | 7 | 0.00000388489 |
| Triticum turgidum | chr5B | 1 | CH_ttu_399 | 3 | 8 | 0.00000984125 |
| Zea mays B73 | 5 | 1 | CH_zma_281 | 2 | 2 | 0.000766969 |
| Allium sativum | chr6 | 2 | CH_asa_195 | 4 | 7 | 0.000000124988 |
| Allium sativum | chr5 | 2 | CH_asa_31 | 8 | 23 | 6.27013e-17 |
| Allium sativum | chr2 | 2 | CH_asa_4 | 11 | 15 | 8.7268e-30 |
| Aegilops tauschii | 5D | 2 | CH_ata_159 | 3 | 12 | 0.00000799742 |
| Chara braunii | BFEA01000343 | 2 | CH_cbr_114 | 2 | 2 | 0.000215781 |
| Hordeum vulgare | chr5H | 2 | CH_hvu_237 | 3 | 16 | 0.0000138262 |
| Micromonas commoda | Chr_01 | 2 | CH_mco_18 | 2 | 2 | 0.000197961 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_110 | 4 | 4 | 0.000000000140159 |
| Saccharum spontaneum | Chr8A | 2 | CH_ssp_434 | 3 | 6 | 0.00000375605 |
| Triticum aestivum | Chr2A | 2 | CH_tae_341 | 4 | 5 | 0.000000000869386 |
| Triticum aestivum | Chr5B | 2 | CH_tae_465 | 4 | 9 | 0.0000000218952 |
| Triticum aestivum | Chr2D | 2 | CH_tae_669 | 3 | 3 | 0.000000929618 |
| Triticum aestivum | Chr5A | 2 | CH_tae_908 | 3 | 6 | 0.000018584 |
| Triticum aestivum | Chr5D | 2 | CH_tae_987 | 3 | 8 | 0.0000520197 |
| Triticum dicoccoides | 5A | 2 | CH_tdi_275 | 3 | 7 | 0.00000388489 |
| Triticum turgidum | chr5B | 2 | CH_ttu_399 | 3 | 8 | 0.00000984125 |
| Zea mays B73 | 5 | 2 | CH_zma_281 | 2 | 2 | 0.000766969 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |