Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.biosynthesis.13-lipoxygenase (LOX)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG19 1 CH_aco_153 2 3 0.000746465
Cenchrus purpureus GWHAORA00000004 1 CH_cpu_790 2 2 0.000463707
Eragrostis curvula 3 1 CH_ecu_284 3 4 0.000000180389
Glycine max Gm20 1 CH_gma_258 3 5 0.00000617845
Lolium perenne Lp_chr6_0 1 CH_lpe_200 3 14 0.0000197296
Oryza sativa Kitaake Chr8 1 CH_osak_453 2 2 0.000562857
Oryza sativa ssp. japonica chr08 1 CH_osa_388 2 2 0.000792184
Populus trichocarpa Chr01 1 CH_ptr_221 3 4 0.00000112241
Saccharum spontaneum Chr4A 1 CH_ssp_404 3 5 0.00000244161
Ananas comosus LG19 2 CH_aco_153 2 3 0.000746465
Cenchrus purpureus GWHAORA00000004 2 CH_cpu_790 2 2 0.000463707
Eragrostis curvula 3 2 CH_ecu_284 3 4 0.000000180389
Glycine max Gm20 2 CH_gma_258 3 5 0.00000617845
Lolium perenne Lp_chr6_0 2 CH_lpe_200 3 14 0.0000197296
Oryza sativa Kitaake Chr8 2 CH_osak_453 2 2 0.000562857
Oryza sativa ssp. japonica chr08 2 CH_osa_388 2 2 0.000792184
Populus trichocarpa Chr01 2 CH_ptr_221 3 4 0.00000112241
Saccharum spontaneum Chr4A 2 CH_ssp_404 3 5 0.00000244161

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001