Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.ethylene.perception and signal transduction.signal transducer (EIN3/EIL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 1 CH_aof_36 3 4 0.00000191966
Allium sativum chr1 1 CH_asa_229 5 24 0.000000409582
Allium sativum chr2 1 CH_asa_74 6 15 0.0000000000319583
Brachypodium distachyon Bd3 1 CH_bdi_353 2 2 0.000925012
Calamus simplicifolius scaffold148 1 CH_calsi_327 2 2 0.000671321
Lolium perenne Lp_chr4_0 1 CH_lpe_412 2 2 0.000674992
Magnolia biondii Chr04 1 CH_mbi_242 3 8 0.00000396109
Sequoiadendron giganteum chr6 1 CH_sgi_1238 2 2 0.000292291
Selaginella moellendorffii scaffold_43 1 CH_smo_81 3 16 0.0000731243
Vanilla planifolia CM028158.1 1 CH_vpl_221 3 15 0.000130186
Asparagus officinalis AsparagusV1_03 2 CH_aof_36 3 4 0.00000191966
Allium sativum chr1 2 CH_asa_229 5 24 0.000000409582
Allium sativum chr2 2 CH_asa_74 6 15 0.0000000000319583
Brachypodium distachyon Bd3 2 CH_bdi_353 2 2 0.000925012
Calamus simplicifolius scaffold148 2 CH_calsi_327 2 2 0.000671321
Lolium perenne Lp_chr4_0 2 CH_lpe_412 2 2 0.000674992
Magnolia biondii Chr04 2 CH_mbi_242 3 8 0.00000396109
Sequoiadendron giganteum chr6 2 CH_sgi_1238 2 2 0.000292291
Selaginella moellendorffii scaffold_43 2 CH_smo_81 3 16 0.0000731243
Vanilla planifolia CM028158.1 2 CH_vpl_221 3 15 0.000130186

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001