Functional clusters
Information
- Type MapMan
- Description Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 3D | 1 | CH_ata_160 | 3 | 5 | 0.00000799879 |
| Cenchrus purpureus | GWHAORA00000013 | 1 | CH_cpu_288 | 5 | 33 | 0.000000106094 |
| Lolium perenne | Lp_chr6_0 | 1 | CH_lpe_329 | 3 | 21 | 0.00024689 |
| Secale cereale | GWHASIY00000003 | 1 | CH_sce_329 | 3 | 3 | 0.0000021144 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_330 | 3 | 3 | 0.0000021144 |
| Secale cereale | GWHASIY00000001 | 1 | CH_sce_418 | 3 | 5 | 0.0000211329 |
| Saccharum spontaneum | Chr8C | 1 | CH_ssp_439 | 3 | 3 | 0.00000383821 |
| Triticum aestivum | Chr3D | 1 | CH_tae_398 | 4 | 5 | 0.00000000455283 |
| Triticum turgidum | chr3B | 1 | CH_ttu_329 | 3 | 3 | 0.00000225639 |
| Aegilops tauschii | 3D | 2 | CH_ata_160 | 3 | 5 | 0.00000799879 |
| Cenchrus purpureus | GWHAORA00000013 | 2 | CH_cpu_288 | 5 | 33 | 0.000000106094 |
| Lolium perenne | Lp_chr6_0 | 2 | CH_lpe_329 | 3 | 21 | 0.00024689 |
| Secale cereale | GWHASIY00000003 | 2 | CH_sce_329 | 3 | 3 | 0.0000021144 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_330 | 3 | 3 | 0.0000021144 |
| Secale cereale | GWHASIY00000001 | 2 | CH_sce_418 | 3 | 5 | 0.0000211329 |
| Saccharum spontaneum | Chr8C | 2 | CH_ssp_439 | 3 | 3 | 0.00000383821 |
| Triticum aestivum | Chr3D | 2 | CH_tae_398 | 4 | 5 | 0.00000000455283 |
| Triticum turgidum | chr3B | 2 | CH_ttu_329 | 3 | 3 | 0.00000225639 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |