Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine peptide receptor (PSKR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG25 1 CH_aco_94 3 18 0.000168091
Amborella trichopoda AmTr_v1.0_scaffold00029 1 CH_atr_313 2 3 0.000714919
Glycine max Gm19 1 CH_gma_549 2 2 0.000569336
Magnolia biondii Chr03 1 CH_mbi_142 3 3 0.0000000353808
Saccharum spontaneum Chr4B 1 CH_ssp_1176 2 2 0.00066805
Triticum aestivum Chr2B 1 CH_tae_377 4 7 0.00000000266326
Triticum aestivum Chr2D 1 CH_tae_378 4 7 0.00000000266326
Triticum dicoccoides 2A 1 CH_tdi_272 3 5 0.00000377946
Triticum dicoccoides 2B 1 CH_tdi_273 3 5 0.00000377946
Triticum turgidum chr2B 1 CH_ttu_340 3 7 0.00000287091
Ananas comosus LG25 2 CH_aco_94 3 18 0.000168091
Amborella trichopoda AmTr_v1.0_scaffold00029 2 CH_atr_313 2 3 0.000714919
Glycine max Gm19 2 CH_gma_549 2 2 0.000569336
Magnolia biondii Chr03 2 CH_mbi_142 3 3 0.0000000353808
Saccharum spontaneum Chr4B 2 CH_ssp_1176 2 2 0.00066805
Triticum aestivum Chr2B 2 CH_tae_377 4 7 0.00000000266326
Triticum aestivum Chr2D 2 CH_tae_378 4 7 0.00000000266326
Triticum dicoccoides 2A 2 CH_tdi_272 3 5 0.00000377946
Triticum dicoccoides 2B 2 CH_tdi_273 3 5 0.00000377946
Triticum turgidum chr2B 2 CH_ttu_340 3 7 0.00000287091

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001