Functional clusters
Information
- Type MapMan
- Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL-precursor polypeptide
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr8 | 1 | CH_asa_611 | 2 | 2 | 0.000232522 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_203 | 3 | 7 | 0.0000156769 |
| Cenchrus purpureus | GWHAORA00000006 | 1 | CH_cpu_292 | 3 | 3 | 0.000000120415 |
| Lolium perenne | Lp_chr1_0 | 1 | CH_lpe_399 | 2 | 3 | 0.000578543 |
| Magnolia biondii | Chr07 | 1 | CH_mbi_141 | 3 | 3 | 0.0000000353808 |
| Oryza brachyantha | 5 | 1 | CH_obr_122 | 3 | 5 | 0.00000449447 |
| Oryza sativa Kitaake | Chr5 | 1 | CH_osak_240 | 3 | 4 | 0.00000543528 |
| Secale cereale | GWHASIY00000005 | 1 | CH_sce_869 | 3 | 19 | 0.000660996 |
| Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_60 | 5 | 7 | 0.00000000000047098 |
| Saccharum spontaneum | Chr3B | 1 | CH_ssp_885 | 2 | 2 | 0.000238589 |
| Triticum aestivum | Chr7B | 1 | CH_tae_708 | 3 | 3 | 0.00000171961 |
| Triticum aestivum | Chr5A | 1 | CH_tae_899 | 3 | 5 | 0.0000171898 |
| Triticum aestivum | Chr5D | 1 | CH_tae_900 | 3 | 5 | 0.0000171898 |
| Allium sativum | chr8 | 2 | CH_asa_611 | 2 | 2 | 0.000232522 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_203 | 3 | 7 | 0.0000156769 |
| Cenchrus purpureus | GWHAORA00000006 | 2 | CH_cpu_292 | 3 | 3 | 0.000000120415 |
| Lolium perenne | Lp_chr1_0 | 2 | CH_lpe_399 | 2 | 3 | 0.000578543 |
| Magnolia biondii | Chr07 | 2 | CH_mbi_141 | 3 | 3 | 0.0000000353808 |
| Oryza brachyantha | 5 | 2 | CH_obr_122 | 3 | 5 | 0.00000449447 |
| Oryza sativa Kitaake | Chr5 | 2 | CH_osak_240 | 3 | 4 | 0.00000543528 |
| Secale cereale | GWHASIY00000005 | 2 | CH_sce_869 | 3 | 19 | 0.000660996 |
| Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_60 | 5 | 7 | 0.00000000000047098 |
| Saccharum spontaneum | Chr3B | 2 | CH_ssp_885 | 2 | 2 | 0.000238589 |
| Triticum aestivum | Chr7B | 2 | CH_tae_708 | 3 | 3 | 0.00000171961 |
| Triticum aestivum | Chr5A | 2 | CH_tae_899 | 3 | 5 | 0.0000171898 |
| Triticum aestivum | Chr5D | 2 | CH_tae_900 | 3 | 5 | 0.0000171898 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |