Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold416 1 CH_calsi_318 2 2 0.000671321
Cenchrus purpureus GWHAORA00000008 1 CH_cpu_179 5 17 0.000000000655569
Cenchrus purpureus GWHAORA00000003 1 CH_cpu_770 4 71 0.000411327
Digitaria exilis Dexi_CM05836_chr06B 1 CH_dex_563 2 2 0.000334202
Eragrostis curvula Contig4 1 CH_ecu_372 4 36 0.00000215539
Glycine max Gm12 1 CH_gma_176 3 3 0.000000259319
Hordeum vulgare chr7H 1 CH_hvu_420 2 2 0.000608754
Lolium perenne Lp_chr7_0.1 1 CH_lpe_352 2 2 0.000321425
Magnolia biondii Chr09 1 CH_mbi_440 2 2 0.000145698
Miscanthus sinensis Chr07 1 CH_msi_145 3 3 0.0000000870898
Oropetium thomaeum contig_89 1 CH_oth_258 2 2 0.000711845
Physcomitrium patens Chr04 1 CH_ppa_68 3 9 0.0000264683
Sorghum bicolor Chr07 1 CH_sbi_175 3 4 0.000000722748
Secale cereale GWHASIY00000002 1 CH_sce_670 3 18 0.000212732
Zoysia japonica ssp. nagirizaki Zjn_sc00150.1 1 CH_zjn_232 2 2 0.0007769
Calamus simplicifolius scaffold416 2 CH_calsi_318 2 2 0.000671321
Cenchrus purpureus GWHAORA00000008 2 CH_cpu_179 5 17 0.000000000655569
Cenchrus purpureus GWHAORA00000003 2 CH_cpu_770 4 71 0.000411327
Digitaria exilis Dexi_CM05836_chr06B 2 CH_dex_563 2 2 0.000334202
Eragrostis curvula Contig4 2 CH_ecu_372 4 36 0.00000215539
Glycine max Gm12 2 CH_gma_176 3 3 0.000000259319
Hordeum vulgare chr7H 2 CH_hvu_420 2 2 0.000608754
Lolium perenne Lp_chr7_0.1 2 CH_lpe_352 2 2 0.000321425
Magnolia biondii Chr09 2 CH_mbi_440 2 2 0.000145698
Miscanthus sinensis Chr07 2 CH_msi_145 3 3 0.0000000870898
Oropetium thomaeum contig_89 2 CH_oth_258 2 2 0.000711845
Physcomitrium patens Chr04 2 CH_ppa_68 3 9 0.0000264683
Sorghum bicolor Chr07 2 CH_sbi_175 3 4 0.000000722748
Secale cereale GWHASIY00000002 2 CH_sce_670 3 18 0.000212732
Zoysia japonica ssp. nagirizaki Zjn_sc00150.1 2 CH_zjn_232 2 2 0.0007769

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001