Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aco011028 Ananas comosus
AET7Gv20362300 Aegilops tauschii
Asa8G03462 Allium sativum
AT3G57110 Arabidopsis thaliana
AT5G60370 Arabidopsis thaliana
ATR1159G017 Amborella trichopoda
Bradi3g20690 Brachypodium distachyon
CALSI_Maker00046012 Calamus simplicifolius
CBR_g2921 Chara braunii
CDE04G2914 Ceratophyllum demersum
CDE07G0204 Ceratophyllum demersum
CDE07G1541 Ceratophyllum demersum
DDU059G0049 Dioscorea dumetorum
Dexi3A01G0009700 Digitaria exilis
Dexi3A01G0009710 Digitaria exilis
Dexi3B01G0009830 Digitaria exilis
Dexi3B01G0009840 Digitaria exilis
EJB05_34179 Eragrostis curvula
evm.TU.AsparagusV1_07.389.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_Unassigned.371.V1.1 Asparagus officinalis
Glyma.11G153378 Glycine max
Glyma.20G125100 Glycine max
GWHGAORA004471 Cenchrus purpureus
GWHGAORA039554 Cenchrus purpureus
GWHGAZTO081575 Oryza alta
Horvu_MOREX_7H01G157900 Hordeum vulgare
HPP92_013896 Vanilla planifolia
Ma06_g34750 Musa acuminata
Mapoly0004s0234 Marchantia polymorpha
Misin16G037100 Miscanthus sinensis
Misin17G028600 Miscanthus sinensis
Misin18G191200 Miscanthus sinensis
OB05G11790 Oryza brachyantha
Os05g0123300 Oryza sativa ssp. japonica
OsKitaake05g018100 Oryza sativa Kitaake
OsR498G0509635000.01 Oryza sativa ssp. indica
Ot_Chr5_g15389 Oropetium thomaeum
p5.00_sc00033_p0003 Elaeis guineensis
Pahal.3G101750 Panicum hallii
Pahal.3G101800 Panicum hallii
Pahal.3G101901 Panicum hallii
PH02Gene41750 Phyllostachys edulis
Pp3c24_6040 Physcomitrium patens
SEGI_09926 Sequoiadendron giganteum
SEGI_18444 Sequoiadendron giganteum
Seita.3G046200 Setaria italica
Seita.3G046300 Setaria italica
Seita.3G046400 Setaria italica
Sevir.3G046950 Setaria viridis
Sevir.3G047100 Setaria viridis
SMO143G0224 Selaginella moellendorffii
Sobic.009G026300 Sorghum bicolor
Solyc11g072400.3 Solanum lycopersicum
Spipo23G0032600 Spirodela polyrhiza
Spipo23G0032700 Spirodela polyrhiza
Sspon.07G0014460-1A Saccharum spontaneum
Sspon.07G0014460-1P Saccharum spontaneum
Sspon.07G0014460-2B Saccharum spontaneum
Sspon.07G0014470-3C Saccharum spontaneum
TraesCS7A03G0333000 Triticum aestivum
TraesCS7B03G0115200 Triticum aestivum
TraesCS7D03G0322000 Triticum aestivum
TRIDC7AG017110 Triticum dicoccoides
TRIDC7BG006440 Triticum dicoccoides
TRITD7Av1G042350 Triticum turgidum
TRITD7Bv1G015970 Triticum turgidum
V3.Lp_chr7_0.1G1466 Lolium perenne
Zjn_sc00016.1.g05390.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00016.1.g05400.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00273.1.g00010.1.am.mk Zoysia japonica ssp. nagirizaki
Zm00001eb265420 Zea mays B73
Zm00007a00048303 Zea mays B104
Zosma04g16550 Zostera marina
Zosma04g25710 Zostera marina

User provided reference genes

Program Settings