Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_344.1056 Anthoceros agrestis
Aco015782 Ananas comosus
Aco015785 Ananas comosus
Aco015789 Ananas comosus
AET6Gv20921300 Aegilops tauschii
Asa4G03178 Allium sativum
Asa7G02055 Allium sativum
AT2G17520 Arabidopsis thaliana
AT3G11870 Arabidopsis thaliana
AT5G24360 Arabidopsis thaliana
ATR0661G147 Amborella trichopoda
ATR0661G287 Amborella trichopoda
ATR0661G358 Amborella trichopoda
ATR0661G464 Amborella trichopoda
ATR0807G006 Amborella trichopoda
Bradi1g28280 Brachypodium distachyon
CALSI_Maker00024780 Calamus simplicifolius
CBR_g81562 Chara braunii
CDE02G2925 Ceratophyllum demersum
CDE04G0343 Ceratophyllum demersum
CDE04G3410 Ceratophyllum demersum
Cre08.g371052 Chlamydomonas reinhardtii
DDU469G0091 Dioscorea dumetorum
DexiUA01G0010810 Digitaria exilis
DexiUA01G0022930 Digitaria exilis
EJB05_12778 Eragrostis curvula
evm.TU.AsparagusV1_04.426.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_04.427.V1.1 Asparagus officinalis
Glyma.01G157800 Glycine max
Glyma.09G197000 Glycine max
Glyma.11G087200 Glycine max
Glyma.16G111800 Glycine max
GWHGAORA007177 Cenchrus purpureus
GWHGAORA007194 Cenchrus purpureus
GWHGAORA048613 Cenchrus purpureus
GWHGASIY034138 Secale cereale
GWHGASIY034175 Secale cereale
GWHGAZTO043760 Oryza alta
Horvu_MOREX_6H01G559700 Hordeum vulgare
HPP92_022537 Vanilla planifolia
HPP92_022543 Vanilla planifolia
HPP92_022544 Vanilla planifolia
Ma03_g30230 Musa acuminata
Ma03_g30240 Musa acuminata
Ma03_g30430 Musa acuminata
Ma09_g22090 Musa acuminata
Mapoly0028s0145 Marchantia polymorpha
MBI08_g06881_MAGBIO Magnolia biondii
MCO01G236 Micromonas commoda
MCO04G221 Micromonas commoda
MCO05G633 Micromonas commoda
Misin03G248600 Miscanthus sinensis
Misin04G281300 Miscanthus sinensis
OB07G19930 Oryza brachyantha
Os07g0471000 Oryza sativa ssp. japonica
OsKitaake07g137200 Oryza sativa Kitaake
OsR498G0714268500.01 Oryza sativa ssp. indica
Ot_Chr7_g13287 Oropetium thomaeum
p5.00_sc00262_p0009 Elaeis guineensis
Pahal.2G369300 Panicum hallii
PH02Gene39047 Phyllostachys edulis
PH02Gene39048 Phyllostachys edulis
PH02Gene45139 Phyllostachys edulis
PH02Gene48485 Phyllostachys edulis
Potri.002G007150 Populus trichocarpa
Potri.002G007201 Populus trichocarpa
Potri.005G254000 Populus trichocarpa
Potri.007G059000 Populus trichocarpa
Pp3c14_20430 Physcomitrium patens
Pp3c17_18370 Physcomitrium patens
SEGI_05417 Sequoiadendron giganteum
Seita.2G310300 Setaria italica
Sevir.2G321600 Setaria viridis
SMO169G0012 Selaginella moellendorffii
SMO300G0023 Selaginella moellendorffii
Sobic.002G299000 Sorghum bicolor
Solyc02g082470.4 Solanum lycopersicum
Solyc04g082620.3 Solanum lycopersicum
Spipo16G0025600 Spirodela polyrhiza
Spipo1G0054400 Spirodela polyrhiza
Sspon.02G0007840-1A Saccharum spontaneum
Sspon.02G0007840-1T Saccharum spontaneum
Sspon.02G0007840-2B Saccharum spontaneum
Sspon.02G0007840-3C Saccharum spontaneum
Sspon.02G0007840-4D Saccharum spontaneum
TraesCS6A03G0951600 Triticum aestivum
TraesCS6B03G1162300 Triticum aestivum
TraesCS6D03G0828600 Triticum aestivum
TRIDC6AG055930 Triticum dicoccoides
TRIDC6BG065420 Triticum dicoccoides
TRITD6Av1G215350 Triticum turgidum
TRITD6Bv1G213900 Triticum turgidum
V3.Lp_chr2_0G8872 Lolium perenne
Zjn_sc00001.1.g10530.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zm00001eb104810 Zea mays B73
Zm00001eb320100 Zea mays B73
Zm00007a00004128 Zea mays B104
Zm00007a00004129 Zea mays B104
Zm00007a00029501 Zea mays B104
Zosma03g21750 Zostera marina

User provided reference genes

Program Settings