Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_369.385 Anthoceros agrestis
Aco007815 Ananas comosus
AET2Gv20670200 Aegilops tauschii
Asa5G03197 Allium sativum
AT5G06180 Arabidopsis thaliana
AT5G22350 Arabidopsis thaliana
ATR0820G255 Amborella trichopoda
Bradi3g45040 Brachypodium distachyon
Bradi5g09491 Brachypodium distachyon
CALSI_Maker00024649 Calamus simplicifolius
CBR_g33922 Chara braunii
CDE06G2666 Ceratophyllum demersum
CDE07G1160 Ceratophyllum demersum
DDU879G0026 Dioscorea dumetorum
DDU892G0006 Dioscorea dumetorum
Dexi1A01G0016060 Digitaria exilis
Dexi1A01G0016270 Digitaria exilis
Dexi1A01G0016280 Digitaria exilis
Dexi1B01G0014920 Digitaria exilis
Dexi1B01G0015170 Digitaria exilis
Dexi7A01G0006010 Digitaria exilis
Dexi7B01G0006910 Digitaria exilis
EJB05_21434 Eragrostis curvula
EJB05_21443 Eragrostis curvula
EJB05_38097 Eragrostis curvula
EJB05_52760 Eragrostis curvula
evm.TU.AsparagusV1_02.823.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_09.88.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_10.541.V1.1 Asparagus officinalis
Glyma.03G198300 Glycine max
Glyma.04G115600 Glycine max
Glyma.11G181700 Glycine max
Glyma.12G091500 Glycine max
Glyma.12G186400 Glycine max
Glyma.13G315100 Glycine max
Glyma.19G196202 Glycine max
GWHGAORA023067 Cenchrus purpureus
GWHGAORA023895 Cenchrus purpureus
GWHGAORA050165 Cenchrus purpureus
GWHGAORA059325 Cenchrus purpureus
GWHGAORA059615 Cenchrus purpureus
GWHGAORA061599 Cenchrus purpureus
GWHGASIY008748 Secale cereale
GWHGAZTO018872 Oryza alta
GWHGAZTO029467 Oryza alta
GWHGAZTO070479 Oryza alta
GWHGAZTO079145 Oryza alta
Horvu_MOREX_2H01G439200 Hordeum vulgare
HPP92_023061 Vanilla planifolia
Ma02_g08690 Musa acuminata
Mapoly0038s0050 Marchantia polymorpha
MCO13G096 Micromonas commoda
Misin03G132300 Miscanthus sinensis
Misin06G179700 Miscanthus sinensis
Misin07G349700 Miscanthus sinensis
Misin08G155100 Miscanthus sinensis
Misin11G066100 Miscanthus sinensis
Misin12G072000 Miscanthus sinensis
Misin16G110100 Miscanthus sinensis
OB02G27070 Oryza brachyantha
OB04G19180 Oryza brachyantha
Os02g0535700 Oryza sativa ssp. japonica
Os04g0414000 Oryza sativa ssp. japonica
OsKitaake02g196400 Oryza sativa Kitaake
OsKitaake04g121500 Oryza sativa Kitaake
OsR498G0204007300.01 Oryza sativa ssp. indica
OsR498G0408532700.01 Oryza sativa ssp. indica
Ot_Chr1_g11365 Oropetium thomaeum
Ot_Chr6_g08660 Oropetium thomaeum
p5.00_sc00012_p0080 Elaeis guineensis
Pahal.1G256100 Panicum hallii
Pahal.7G140900 Panicum hallii
PH02Gene06198 Phyllostachys edulis
PH02Gene16847 Phyllostachys edulis
PH02Gene17753 Phyllostachys edulis
PH02Gene30784 Phyllostachys edulis
PH02Gene49860 Phyllostachys edulis
PH02Gene49947 Phyllostachys edulis
Potri.004G197000 Populus trichocarpa
Potri.009G159900 Populus trichocarpa
Potri.016G075500 Populus trichocarpa
Pp3c20_13230 Physcomitrium patens
Pp3c23_3410 Physcomitrium patens
SEGI_06630 Sequoiadendron giganteum
SEGI_37149 Sequoiadendron giganteum
Seita.1G182200 Setaria italica
Seita.7G092300 Setaria italica
Seita.9G233600 Setaria italica
Sevir.1G185300 Setaria viridis
Sevir.7G099900 Setaria viridis
SMO196G0287 Selaginella moellendorffii
Sobic.004G167200 Sorghum bicolor
Sobic.006G072501 Sorghum bicolor
Solyc09g010320.3 Solanum lycopersicum
Solyc11g068650.2 Solanum lycopersicum
Spipo7G0036600 Spirodela polyrhiza
Sspon.03G0012920-1A Saccharum spontaneum
Sspon.04G0025710-1B Saccharum spontaneum
Sspon.04G0025710-2C Saccharum spontaneum
Sspon.04G0025710-3D Saccharum spontaneum
Sspon.05G0025980-1B Saccharum spontaneum
Sspon.05G0025980-2D Saccharum spontaneum
TraesCS2A03G0737300 Triticum aestivum
TraesCS2B03G0814100 Triticum aestivum
TraesCS2D03G0680500 Triticum aestivum
TRIDC2AG042790 Triticum dicoccoides
TRIDC2BG045860 Triticum dicoccoides
TRITD2Av1G179940 Triticum turgidum
TRITD2Bv1G148430 Triticum turgidum
V3.Lp_chr2_0G15350 Lolium perenne
V3.Lp_chr6_0G10700 Lolium perenne
Zjn_sc00020.1.g01710.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zm00001eb181500 Zea mays B73
Zm00007a00005040 Zea mays B104
Zm00007a00005042 Zea mays B104
Zosma02g01860 Zostera marina
Zosma05g02700 Zostera marina

User provided reference genes

Program Settings