Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_228.1459 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis
Aco002506 Ananas comosus
AET1Gv20563900 Aegilops tauschii
Asa1G00450 Allium sativum
Asa2G05520 Allium sativum
Asa3G03455 Allium sativum
Asa5G00823 Allium sativum
Asa6G06148 Allium sativum
Asa6G06470 Allium sativum
Asa8G06168 Allium sativum
AT1G50030 Arabidopsis thaliana
ATR0753G079 Amborella trichopoda
Bradi2g28007 Brachypodium distachyon
CALSI_Maker00000053 Calamus simplicifolius
CALSI_Maker00011685 Calamus simplicifolius
CALSI_Maker00044339 Calamus simplicifolius
CALSI_Maker00047308 Calamus simplicifolius
CALSI_Maker00049331 Calamus simplicifolius
CALSI_Maker00050331 Calamus simplicifolius
CALSI_Maker00050353 Calamus simplicifolius
CBR_g11104 Chara braunii
CBR_g23926 Chara braunii
CBR_g3294 Chara braunii
CBR_g49725 Chara braunii
CDE04G3197 Ceratophyllum demersum
CDE06G0012 Ceratophyllum demersum
CDE06G2212 Ceratophyllum demersum
CDE06G2553 Ceratophyllum demersum
Cre09.g397327 Chlamydomonas reinhardtii
Cre09.g400553 Chlamydomonas reinhardtii
DDU784G0035 Dioscorea dumetorum
DDU801G0210 Dioscorea dumetorum
Dexi3A01G0026450 Digitaria exilis
Dexi3A01G0026460 Digitaria exilis
Dexi3B01G0027260 Digitaria exilis
Dexi3B01G0027280 Digitaria exilis
EJB05_35086 Eragrostis curvula
EJB05_47768 Eragrostis curvula
evm.TU.AsparagusV1_01.1918.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_03.1646.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_03.1647.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_03.1652.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_03.1654.V1.1 Asparagus officinalis
Glyma.01G241300 Glycine max
Glyma.09G081460 Glycine max
Glyma.11G002600 Glycine max
GWHGAORA002675 Cenchrus purpureus
GWHGAORA037625 Cenchrus purpureus
GWHGASIY003077 Secale cereale
GWHGAZTO033441 Oryza alta
GWHGAZTO082483 Oryza alta
Horvu_MOREX_1H01G375600 Hordeum vulgare
HPP92_016412 Vanilla planifolia
Ma04_g01290 Musa acuminata
Mapoly0047s0119 Marchantia polymorpha
Mapoly0069s0061 Marchantia polymorpha
MBI03_g18482_MAGBIO Magnolia biondii
MBI03_g18483_MAGBIO Magnolia biondii
MBI04_g22054_MAGBIO Magnolia biondii
MBI04_g33444_MAGBIO Magnolia biondii
MBI11_g39916_MAGBIO Magnolia biondii
MBI18_g33401_MAGBIO Magnolia biondii
MBI19_g03781_MAGBIO Magnolia biondii
MBI19_g04965_MAGBIO Magnolia biondii
MBI19_g14019_MAGBIO Magnolia biondii
MCO06G142 Micromonas commoda
MCO15G108 Micromonas commoda
Misin15G184900 Miscanthus sinensis
OB05G17280 Oryza brachyantha
Os05g0235300 Oryza sativa ssp. japonica
OsKitaake05g082400 Oryza sativa Kitaake
OsR498G0510103900.01 Oryza sativa ssp. indica
Ot_Chr7_g10366 Oropetium thomaeum
p5.00_sc00063_p0008 Elaeis guineensis
Pahal.3G315200 Panicum hallii
PH02Gene33622 Phyllostachys edulis
PH02Gene44481 Phyllostachys edulis
PH02Gene44558 Phyllostachys edulis
Potri.001G289200 Populus trichocarpa
Potri.009G084500 Populus trichocarpa
Pp3c6_4910 Physcomitrium patens
Pp3c9_15240 Physcomitrium patens
PRCOL_00002418 Prasinoderma coloniale
PRCOL_00006012 Prasinoderma coloniale
SEGI_00024 Sequoiadendron giganteum
SEGI_05324 Sequoiadendron giganteum
SEGI_07133 Sequoiadendron giganteum
SEGI_12344 Sequoiadendron giganteum
SEGI_17280 Sequoiadendron giganteum
SEGI_17946 Sequoiadendron giganteum
SEGI_21899 Sequoiadendron giganteum
SEGI_30166 Sequoiadendron giganteum
SEGI_32787 Sequoiadendron giganteum
SEGI_34966 Sequoiadendron giganteum
SEGI_35250 Sequoiadendron giganteum
Seita.3G273900 Setaria italica
Sevir.3G281050 Setaria viridis
Sevir.3G281300 Setaria viridis
SMO147G0225 Selaginella moellendorffii
SMO351G0307 Selaginella moellendorffii
Sobic.009G109200 Sorghum bicolor
Solyc01g106770.4 Solanum lycopersicum
Solyc01g106840.2 Solanum lycopersicum
Solyc01g106860.4 Solanum lycopersicum
Spipo4G0078200 Spirodela polyrhiza
Sspon.07G0009760-1A Saccharum spontaneum
Sspon.07G0009760-2B Saccharum spontaneum
Sspon.07G0009760-3C Saccharum spontaneum
Sspon.07G0009760-4D Saccharum spontaneum
TraesCS1A03G0592800 Triticum aestivum
TraesCS1B03G0687800 Triticum aestivum
TraesCS1D03G0564400 Triticum aestivum
TRIDC1AG034260 Triticum dicoccoides
TRIDC1BG039700 Triticum dicoccoides
TRITD1Av1G145560 Triticum turgidum
TRITD1Bv1G137350 Triticum turgidum
V3.Lp_chr1_0G13938 Lolium perenne
Zjn_sc00001.1.g02180.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zm00001eb285840 Zea mays B73
Zm00007a00044727 Zea mays B104
Zm00007a00045482 Zea mays B104
Zm00007a00045483 Zea mays B104
Zm00007a00048597 Zea mays B104
Zosma06g02840 Zostera marina

User provided reference genes

Program Settings