Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_117.453 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.455 Anthoceros agrestis
Aco000210 Ananas comosus
Aco004224 Ananas comosus
AET1Gv20961200 Aegilops tauschii
AET5Gv20702800 Aegilops tauschii
Asa3G00311 Allium sativum
Asa3G02779 Allium sativum
Asa4G04689 Allium sativum
AT5G28840 Arabidopsis thaliana
ATR0665G322 Amborella trichopoda
Bradi3g26860 Brachypodium distachyon
Bradi4g14950 Brachypodium distachyon
CALSI_Maker00001730 Calamus simplicifolius
CALSI_Maker00041780 Calamus simplicifolius
CALSI_Maker00042522 Calamus simplicifolius
CBR_g28830 Chara braunii
CDE04G2651 Ceratophyllum demersum
CDE06G2828 Ceratophyllum demersum
CDE07G1835 Ceratophyllum demersum
Cre01.g019250 Chlamydomonas reinhardtii
DDU070G0003 Dioscorea dumetorum
DDU072G0025 Dioscorea dumetorum
DDU274G0418 Dioscorea dumetorum
DDU693G0576 Dioscorea dumetorum
Dexi6A01G0004160 Digitaria exilis
Dexi6B01G0003860 Digitaria exilis
Dexi8A01G0013680 Digitaria exilis
Dexi8B01G0012370 Digitaria exilis
Dexi8B01G0012380 Digitaria exilis
EJB05_22724 Eragrostis curvula
EJB05_27571 Eragrostis curvula
EJB05_27600 Eragrostis curvula
evm.TU.AsparagusV1_03.553.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_07.3224.V1.1 Asparagus officinalis
Glyma.03G247000 Glycine max
Glyma.10G162000 Glycine max
Glyma.19G244600 Glycine max
Glyma.19G244700 Glycine max
Glyma.20G224400 Glycine max
GWHGAORA001481 Cenchrus purpureus
GWHGAORA013114 Cenchrus purpureus
GWHGAORA013130 Cenchrus purpureus
GWHGAORA018005 Cenchrus purpureus
GWHGAORA043312 Cenchrus purpureus
GWHGAORA043467 Cenchrus purpureus
GWHGAORA052463 Cenchrus purpureus
GWHGASIY005150 Secale cereale
GWHGASIY027247 Secale cereale
GWHGAZTO008566 Oryza alta
GWHGAZTO012571 Oryza alta
GWHGAZTO060898 Oryza alta
Horvu_MOREX_1H01G573100 Hordeum vulgare
Horvu_MOREX_5H01G464300 Hordeum vulgare
HPP92_017643 Vanilla planifolia
Ma02_g19280 Musa acuminata
Ma03_g26550 Musa acuminata
Ma07_g07650 Musa acuminata
Ma08_g04360 Musa acuminata
Mapoly0101s0064 Marchantia polymorpha
MBI04_g19770_MAGBIO Magnolia biondii
MBI11_g28617_MAGBIO Magnolia biondii
MCO09G112 Micromonas commoda
MCO17G082 Micromonas commoda
Misin01G225400 Miscanthus sinensis
Misin02G215900 Miscanthus sinensis
Misin10G144800 Miscanthus sinensis
Misin10G147300 Miscanthus sinensis
OB10G17930 Oryza brachyantha
OB11G24000 Oryza brachyantha
Os10g0417600 Oryza sativa ssp. japonica
Os11g0591100 Oryza sativa ssp. japonica
OsKitaake10g097600 Oryza sativa Kitaake
OsKitaake11g181500 Oryza sativa Kitaake
OsR498G1018728100.01 Oryza sativa ssp. indica
OsR498G1120431000.01 Oryza sativa ssp. indica
Ot_Chr1_g20918 Oropetium thomaeum
p5.00_sc00072_p0027 Elaeis guineensis
p5.00_sc00072_p0028 Elaeis guineensis
p5.00_sc00074_p0023 Elaeis guineensis
p5.00_sc00127_p0072 Elaeis guineensis
Pahal.6G035800 Panicum hallii
Pahal.8G219100 Panicum hallii
Pahal.9G249300 Panicum hallii
PH02Gene11252 Phyllostachys edulis
PH02Gene17198 Phyllostachys edulis
PH02Gene25436 Phyllostachys edulis
PH02Gene44900 Phyllostachys edulis
PH02Gene45506 Phyllostachys edulis
PH02Gene48667 Phyllostachys edulis
PH02Gene48929 Phyllostachys edulis
Potri.005G053000 Populus trichocarpa
Potri.013G040600 Populus trichocarpa
Pp3c17_15920 Physcomitrium patens
Pp3c1_30660 Physcomitrium patens
Pp3c23_6850 Physcomitrium patens
Pp3c2_7940 Physcomitrium patens
Pp3c3_10859 Physcomitrium patens
PRCOL_00005834 Prasinoderma coloniale
PRCOL_00006583 Prasinoderma coloniale
SEGI_25647 Sequoiadendron giganteum
Seita.6G060000 Setaria italica
Seita.8G168800 Setaria italica
Seita.9G263600 Setaria italica
Sevir.6G057600 Setaria viridis
Sevir.8G178400 Setaria viridis
Sevir.9G266500 Setaria viridis
SMO001G0012 Selaginella moellendorffii
SMO199G0116 Selaginella moellendorffii
SMO203G0029 Selaginella moellendorffii
SMO307G0043 Selaginella moellendorffii
SMO327G0015 Selaginella moellendorffii
SMO353G0319 Selaginella moellendorffii
SMO353G0345 Selaginella moellendorffii
SMO364G0309 Selaginella moellendorffii
SMO364G0429 Selaginella moellendorffii
Sobic.001G247600 Sorghum bicolor
Sobic.005G168600 Sorghum bicolor
Solyc01g097340.3 Solanum lycopersicum
Solyc09g082990.3 Solanum lycopersicum
Spipo3G0089800 Spirodela polyrhiza
Sspon.01G0018000-1A Saccharum spontaneum
Sspon.01G0018000-1P Saccharum spontaneum
Sspon.01G0018000-2C Saccharum spontaneum
Sspon.01G0018000-3D Saccharum spontaneum
Sspon.06G0016170-1A Saccharum spontaneum
Sspon.06G0016170-1P Saccharum spontaneum
Sspon.06G0016170-2B Saccharum spontaneum
Sspon.06G0016170-3C Saccharum spontaneum
Sspon.06G0016170-4D Saccharum spontaneum
Sspon.06G0016180-2C Saccharum spontaneum
TraesCS1A03G0982700 Triticum aestivum
TraesCS1B03G1166600 Triticum aestivum
TraesCS1D03G0951700 Triticum aestivum
TraesCS5A03G0736900 Triticum aestivum
TraesCS5B03G0773300 Triticum aestivum
TraesCS5D03G0701800 Triticum aestivum
TRIDC1AG059280 Triticum dicoccoides
TRIDC5AG045180 Triticum dicoccoides
TRIDC5BG049010 Triticum dicoccoides
TRITD1Av1G209200 Triticum turgidum
TRITD1Bv1G215020 Triticum turgidum
TRITD5Av1G174460 Triticum turgidum
TRITD5Bv1G164910 Triticum turgidum
V3.Lp_chr4_0G15082 Lolium perenne
V3.Lp_chr5_0G5078 Lolium perenne
Zjn_sc00033.1.g02230.1.am.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00080.1.g00360.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zm00001eb047980 Zea mays B73
Zm00001eb167750 Zea mays B73
Zm00007a00003887 Zea mays B104
Zm00007a00039996 Zea mays B104
Zosma05g32640 Zostera marina
Zosma06g24100 Zostera marina

User provided reference genes

Program Settings