Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_344.1951 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2870 Anthoceros agrestis
Aco006035 Ananas comosus
Aco013484 Ananas comosus
AET1Gv20834700 Aegilops tauschii
AET5Gv21179300 Aegilops tauschii
Asa3G01422 Allium sativum
Asa5G01715 Allium sativum
Asa6G01395 Allium sativum
AT1G29330 Arabidopsis thaliana
AT3G25040 Arabidopsis thaliana
ATR0012G042 Amborella trichopoda
ATR0829G153 Amborella trichopoda
ATR0942G001 Amborella trichopoda
Bradi2g19040 Brachypodium distachyon
Bradi4g19070 Brachypodium distachyon
Bradi5g07270 Brachypodium distachyon
CALSI_Maker00008384 Calamus simplicifolius
CALSI_Maker00013469 Calamus simplicifolius
CALSI_Maker00014217 Calamus simplicifolius
CALSI_Maker00038321 Calamus simplicifolius
CALSI_Maker00047509 Calamus simplicifolius
CBR_g36445 Chara braunii
CDE04G1297 Ceratophyllum demersum
CDE05G0327 Ceratophyllum demersum
CDE05G1256 Ceratophyllum demersum
Cre01.g051400 Chlamydomonas reinhardtii
Cre06.g309350 Chlamydomonas reinhardtii
DDU227G0005 Dioscorea dumetorum
DDU314G0103 Dioscorea dumetorum
DDU345G0001 Dioscorea dumetorum
DDU469G0288 Dioscorea dumetorum
DDU613G0095 Dioscorea dumetorum
Dexi3A01G0018210 Digitaria exilis
Dexi3B01G0018640 Digitaria exilis
Dexi8A01G0009870 Digitaria exilis
Dexi8B01G0008820 Digitaria exilis
EJB05_27993 Eragrostis curvula
EJB05_28008 Eragrostis curvula
EJB05_36709 Eragrostis curvula
EJB05_37309 Eragrostis curvula
EJB05_37316 Eragrostis curvula
Glyma.05G161700 Glycine max
Glyma.08G119300 Glycine max
Glyma.08G351200 Glycine max
Glyma.18G164800 Glycine max
GWHGAORA003667 Cenchrus purpureus
GWHGAORA011698 Cenchrus purpureus
GWHGAORA038626 Cenchrus purpureus
GWHGAORA043530 Cenchrus purpureus
GWHGASIY004805 Secale cereale
GWHGASIY036985 Secale cereale
GWHGASIY036990 Secale cereale
GWHGAZTO011928 Oryza alta
GWHGAZTO035843 Oryza alta
GWHGAZTO063942 Oryza alta
GWHGAZTO078818 Oryza alta
GWHGAZTO084777 Oryza alta
Horvu_MOREX_1H01G528500 Hordeum vulgare
Horvu_MOREX_5H01G719300 Hordeum vulgare
HPP92_003175 Vanilla planifolia
HPP92_007785 Vanilla planifolia
Ma04_g08360 Musa acuminata
Ma04_g10390 Musa acuminata
Ma06_g22300 Musa acuminata
Ma06_g22310 Musa acuminata
Ma09_g01540 Musa acuminata
Mapoly0044s0129 Marchantia polymorpha
MBI07_g00454_MAGBIO Magnolia biondii
MBI07_g28645_MAGBIO Magnolia biondii
MCO01G160 Micromonas commoda
Misin09G118700 Miscanthus sinensis
Misin10G095600 Miscanthus sinensis
Misin16G203500 Miscanthus sinensis
Misin17G210300 Miscanthus sinensis
OB05G31140 Oryza brachyantha
OB11G20410 Oryza brachyantha
Os04g0376700 Oryza sativa ssp. japonica
Os05g0529300 Oryza sativa ssp. japonica
Os11g0473000 Oryza sativa ssp. japonica
OsKitaake04g099400 Oryza sativa Kitaake
OsKitaake05g235700 Oryza sativa Kitaake
OsKitaake11g131200 Oryza sativa Kitaake
OsR498G0408377200.01 Oryza sativa ssp. indica
OsR498G0511225600.01 Oryza sativa ssp. indica
OsR498G1120125900.01 Oryza sativa ssp. indica
Ot_Chr5_g03635 Oropetium thomaeum
p5.00_sc00018_p0017 Elaeis guineensis
p5.00_sc00059_p0111 Elaeis guineensis
p5.00_sc00075_p0045 Elaeis guineensis
p5.00_sc00082_p0011 Elaeis guineensis
p5.00_sc00157_p0006 Elaeis guineensis
Pahal.3G204500 Panicum hallii
Pahal.7G116700 Panicum hallii
Pahal.8G157100 Panicum hallii
PH02Gene14317 Phyllostachys edulis
PH02Gene24180 Phyllostachys edulis
PH02Gene24865 Phyllostachys edulis
PH02Gene36434 Phyllostachys edulis
PH02Gene38545 Phyllostachys edulis
PH02Gene41374 Phyllostachys edulis
Potri.001G315800 Populus trichocarpa
Potri.011G071200 Populus trichocarpa
Potri.017G056000 Populus trichocarpa
Pp3c15_12830 Physcomitrium patens
Pp3c9_13230 Physcomitrium patens
PRCOL_00001467 Prasinoderma coloniale
SEGI_04461 Sequoiadendron giganteum
SEGI_29301 Sequoiadendron giganteum
SEGI_34480 Sequoiadendron giganteum
Seita.3G170000 Setaria italica
Seita.7G065500 Setaria italica
Seita.8G116200 Setaria italica
Sevir.3G174200 Setaria viridis
Sevir.7G072000 Setaria viridis
Sevir.8G122300 Setaria viridis
SMO351G0518 Selaginella moellendorffii
SMO367G0725 Selaginella moellendorffii
Sobic.005G112100 Sorghum bicolor
Sobic.009G207200 Sorghum bicolor
Solyc02g072120.3 Solanum lycopersicum
Solyc09g091900.4 Solanum lycopersicum
Spipo13G0028200 Spirodela polyrhiza
Spipo18G0019300 Spirodela polyrhiza
Spipo9G0064200 Spirodela polyrhiza
Sspon.06G0013950-1A Saccharum spontaneum
Sspon.06G0013950-1P Saccharum spontaneum
Sspon.06G0013950-2D Saccharum spontaneum
Sspon.07G0000090-1A Saccharum spontaneum
Sspon.07G0000090-2B Saccharum spontaneum
Sspon.07G0000090-3D Saccharum spontaneum
TraesCS1A03G0855900 Triticum aestivum
TraesCS1B03G0990600 Triticum aestivum
TraesCS4A03G0847400 Triticum aestivum
TraesCS5B03G1294900 Triticum aestivum
TraesCS5D03G1160700 Triticum aestivum
TRIDC1AG051460 Triticum dicoccoides
TRIDC1BG058700 Triticum dicoccoides
TRIDC4AG051390 Triticum dicoccoides
TRIDC5BG079220 Triticum dicoccoides
TRITD1Av1G200560 Triticum turgidum
TRITD1Bv1G191990 Triticum turgidum
TRITD4Av1G215570 Triticum turgidum
TRITD5Bv1G244690 Triticum turgidum
V3.Lp_chr1_0G15954 Lolium perenne
V3.Lp_chr1_0G4474 Lolium perenne
V3.Lp_chr2_0G14448 Lolium perenne
Zjn_sc00027.1.g03940.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00052.1.g01260.1.cf.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00061.1.g00560.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00090.1.g01300.1.am.mk Zoysia japonica ssp. nagirizaki
Zm00001eb090540 Zea mays B73
Zm00001eb293350 Zea mays B73
Zm00001eb353690 Zea mays B73
Zm00007a00008363 Zea mays B104
Zm00007a00022736 Zea mays B104
Zm00007a00036121 Zea mays B104
Zm00007a00036124 Zea mays B104
Zosma04g01510 Zostera marina
Zosma05g02220 Zostera marina

User provided reference genes

Program Settings