Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_228.1882 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.955 Anthoceros agrestis
Aco022953 Ananas comosus
Aco028107 Ananas comosus
Aco028200 Ananas comosus
AET4Gv20744200 Aegilops tauschii
AET4Gv20744400 Aegilops tauschii
Asa7G05340 Allium sativum
Asa7G05418 Allium sativum
Asa7G05533 Allium sativum
Asa7G06691 Allium sativum
AT2G36810 Arabidopsis thaliana
AT5G04440 Arabidopsis thaliana
ATR0043G024 Amborella trichopoda
ATR0043G051 Amborella trichopoda
Bradi1g75250 Brachypodium distachyon
Bradi1g75262 Brachypodium distachyon
CALSI_Maker00002387 Calamus simplicifolius
CALSI_Maker00008186 Calamus simplicifolius
CALSI_Maker00008190 Calamus simplicifolius
CALSI_Maker00009865 Calamus simplicifolius
CALSI_Maker00029284 Calamus simplicifolius
CBR_g10878 Chara braunii
CBR_g37399 Chara braunii
CBR_g53950 Chara braunii
CDE07G0268 Ceratophyllum demersum
CDE07G0362 Ceratophyllum demersum
CDE09G1384 Ceratophyllum demersum
Cre06.g264550 Chlamydomonas reinhardtii
Cre16.g677850 Chlamydomonas reinhardtii
DDU407G0020 Dioscorea dumetorum
DDU804G0001 Dioscorea dumetorum
DDU804G0002 Dioscorea dumetorum
DDU805G0006 Dioscorea dumetorum
Dexi9A01G0047110 Digitaria exilis
Dexi9A01G0047120 Digitaria exilis
Dexi9B01G0046500 Digitaria exilis
Dexi9B01G0046510 Digitaria exilis
Dexi9B01G0046520 Digitaria exilis
Dexi9B01G0046530 Digitaria exilis
EJB05_08016 Eragrostis curvula
EJB05_08018 Eragrostis curvula
evm.TU.AsparagusV1_04.3341.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_04.3343.V1.1 Asparagus officinalis
Glyma.02G164300 Glycine max
Glyma.03G186800 Glycine max
Glyma.10G102440 Glycine max
Glyma.19G186900 Glycine max
Glyma.U031112 Glycine max
GWHGAORA026228 Cenchrus purpureus
GWHGAORA054443 Cenchrus purpureus
GWHGASIY037634 Secale cereale
GWHGASIY037635 Secale cereale
GWHGASIY037640 Secale cereale
GWHGAZTO000489 Oryza alta
GWHGAZTO000490 Oryza alta
GWHGAZTO022120 Oryza alta
GWHGAZTO022121 Oryza alta
Horvu_MOREX_4H01G465500 Hordeum vulgare
Horvu_MOREX_4H01G465600 Hordeum vulgare
HPP92_004967 Vanilla planifolia
HPP92_022597 Vanilla planifolia
Ma04_g20450 Musa acuminata
Ma04_g35790 Musa acuminata
Mapoly0008s0039 Marchantia polymorpha
Mapoly0083s0065 Marchantia polymorpha
MBI03_g13096_MAGBIO Magnolia biondii
MBI05_g14868_MAGBIO Magnolia biondii
MBI11_g23276_MAGBIO Magnolia biondii
MBI11_g29032_MAGBIO Magnolia biondii
MBI15_g35614_MAGBIO Magnolia biondii
MBI15_g45591_MAGBIO Magnolia biondii
MBI16_g06660_MAGBIO Magnolia biondii
MBI17_g12240_MAGBIO Magnolia biondii
MBI18_g37353_MAGBIO Magnolia biondii
MBI19_g03561_MAGBIO Magnolia biondii
MBI19_g13910_MAGBIO Magnolia biondii
MCO03G547 Micromonas commoda
MCO14G381 Micromonas commoda
Misin01G482300 Miscanthus sinensis
Misin01G482400 Miscanthus sinensis
Misin02G475600 Miscanthus sinensis
Misin02G475700 Miscanthus sinensis
OB03G13730 Oryza brachyantha
OB03G13740 Oryza brachyantha
Os03g0146500 Oryza sativa ssp. japonica
Os03g0146600 Oryza sativa ssp. japonica
OsKitaake03g038100 Oryza sativa Kitaake
OsKitaake03g038200 Oryza sativa Kitaake
OsR498G0305226700.01 Oryza sativa ssp. indica
OsR498G0305226900.01 Oryza sativa ssp. indica
Ot_Chr4_g00068 Oropetium thomaeum
Ot_Chr4_g00072 Oropetium thomaeum
p5.00_sc00085_p0007 Elaeis guineensis
p5.00_sc00085_p0008 Elaeis guineensis
p5.00_sc00441_p0003 Elaeis guineensis
Pahal.9G605400 Panicum hallii
Pahal.9G605500 Panicum hallii
PH02Gene03619 Phyllostachys edulis
PH02Gene17076 Phyllostachys edulis
PH02Gene17133 Phyllostachys edulis
PH02Gene33417 Phyllostachys edulis
Potri.006G120800 Populus trichocarpa
Potri.008G030300 Populus trichocarpa
Potri.010G230900 Populus trichocarpa
Pp3c1_19240 Physcomitrium patens
Pp3c22_4780 Physcomitrium patens
Pp3c2_21970 Physcomitrium patens
PRCOL_00001490 Prasinoderma coloniale
PRCOL_00003535 Prasinoderma coloniale
SEGI_09433 Sequoiadendron giganteum
SEGI_13772 Sequoiadendron giganteum
SEGI_20571 Sequoiadendron giganteum
SEGI_23674 Sequoiadendron giganteum
SEGI_24462 Sequoiadendron giganteum
SEGI_32647 Sequoiadendron giganteum
SEGI_39450 Sequoiadendron giganteum
Seita.9G540900 Setaria italica
Seita.9G541000 Setaria italica
Sevir.9G545400 Setaria viridis
Sevir.9G545500 Setaria viridis
SMO137G0253 Selaginella moellendorffii
SMO196G0037 Selaginella moellendorffii
SMO207G0008 Selaginella moellendorffii
Sobic.001G504200 Sorghum bicolor
Sobic.001G504400 Sorghum bicolor
Solyc05g055430.4 Solanum lycopersicum
Solyc09g008490.4 Solanum lycopersicum
Spipo16G0041400 Spirodela polyrhiza
Spipo16G0041500 Spirodela polyrhiza
Spipo17G0044500 Spirodela polyrhiza
Sspon.01G0002700-1A Saccharum spontaneum
Sspon.01G0002700-1P Saccharum spontaneum
Sspon.01G0002700-2B Saccharum spontaneum
Sspon.01G0002700-3C Saccharum spontaneum
Sspon.01G0002750-1A Saccharum spontaneum
Sspon.01G0002760-1A Saccharum spontaneum
Sspon.01G0002770-1A Saccharum spontaneum
Sspon.01G0002770-2C Saccharum spontaneum
TraesCS4A03G1018000 Triticum aestivum
TraesCS4A03G1018100 Triticum aestivum
TraesCS4B03G0810300 Triticum aestivum
TraesCS4B03G0810400 Triticum aestivum
TraesCS4D03G0726700 Triticum aestivum
TraesCS4D03G0726800 Triticum aestivum
TRIDC4AG055520 Triticum dicoccoides
TRIDC4AG055530 Triticum dicoccoides
TRIDC4BG052910 Triticum dicoccoides
TRIDC4BG052920 Triticum dicoccoides
TRITD4Av1G227130 Triticum turgidum
TRITD4Av1G227140 Triticum turgidum
TRITD4Bv1G179090 Triticum turgidum
TRITD4Bv1G179100 Triticum turgidum
V3.Lp_chr4_0G26412 Lolium perenne
V3.Lp_chr4_0G26416 Lolium perenne
Zjn_sc00002.1.g14410.1.am.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00002.1.g14430.1.sm.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00003.1.g12510.1.am.mkhc Zoysia japonica ssp. nagirizaki
Zm00001eb003780 Zea mays B73
Zm00001eb003810 Zea mays B73
Zm00001eb006030 Zea mays B73
Zm00001eb313560 Zea mays B73
Zm00001eb403350 Zea mays B73
Zm00007a00002056 Zea mays B104
Zm00007a00002061 Zea mays B104
Zm00007a00002062 Zea mays B104
Zm00007a00002063 Zea mays B104
Zm00007a00002064 Zea mays B104
Zm00007a00002065 Zea mays B104
Zm00007a00022755 Zea mays B104
Zm00007a00030855 Zea mays B104
Zm00007a00041089 Zea mays B104
Zm00007a00051020 Zea mays B104
Zm00007a00052619 Zea mays B104
Zosma05g27540 Zostera marina
Zosma05g27550 Zostera marina

User provided reference genes

Program Settings