Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_362.2371 Anthoceros agrestis
Aco002331 Ananas comosus
Aco006306 Ananas comosus
Aco023002 Ananas comosus
Aco028874 Ananas comosus
AET3Gv20225100 Aegilops tauschii
AET3Gv20225600 Aegilops tauschii
AET3Gv21143000 Aegilops tauschii
AET3Gv21143200 Aegilops tauschii
AET3Gv21143400 Aegilops tauschii
AET3Gv21143600 Aegilops tauschii
AET3Gv21143800 Aegilops tauschii
Asa3G00123 Allium sativum
Asa7G06099 Allium sativum
Asa7G06100 Allium sativum
AT3G27890 Arabidopsis thaliana
ATR0745G009 Amborella trichopoda
Bradi2g57370 Brachypodium distachyon
Bradi2g61070 Brachypodium distachyon
Bradi2g61090 Brachypodium distachyon
CALSI_Maker00023651 Calamus simplicifolius
CALSI_Maker00036297 Calamus simplicifolius
CALSI_Maker00036304 Calamus simplicifolius
CALSI_Maker00036308 Calamus simplicifolius
DDU009G0033 Dioscorea dumetorum
DDU256G0317 Dioscorea dumetorum
DDU482G0004 Dioscorea dumetorum
Dexi5A01G0039090 Digitaria exilis
Dexi5A01G0039100 Digitaria exilis
Dexi5B01G0038820 Digitaria exilis
Dexi5B01G0038830 Digitaria exilis
Dexi9A01G0035060 Digitaria exilis
Dexi9A01G0035120 Digitaria exilis
Dexi9B01G0033720 Digitaria exilis
Dexi9B01G0033780 Digitaria exilis
EJB05_06525 Eragrostis curvula
EJB05_18767 Eragrostis curvula
EJB05_18772 Eragrostis curvula
EJB05_18774 Eragrostis curvula
evm.TU.AsparagusV1_05.63.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_05.64.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_07.1684.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_Unassigned.822.V1.1 Asparagus officinalis
Glyma.04G140400 Glycine max
Glyma.11G152400 Glycine max
Glyma.13G196500 Glycine max
Glyma.13G196600 Glycine max
GWHGAORA027616 Cenchrus purpureus
GWHGAORA027618 Cenchrus purpureus
GWHGAORA030111 Cenchrus purpureus
GWHGAORA030112 Cenchrus purpureus
GWHGAORA030164 Cenchrus purpureus
GWHGAORA030165 Cenchrus purpureus
GWHGAORA030167 Cenchrus purpureus
GWHGAORA046262 Cenchrus purpureus
GWHGAORA046264 Cenchrus purpureus
GWHGAORA046265 Cenchrus purpureus
GWHGAORA056057 Cenchrus purpureus
GWHGAORA064246 Cenchrus purpureus
GWHGASIY013695 Secale cereale
GWHGASIY023029 Secale cereale
GWHGASIY034931 Secale cereale
GWHGASIY034939 Secale cereale
GWHGASIY034941 Secale cereale
GWHGASIY034942 Secale cereale
GWHGASIY034944 Secale cereale
GWHGASIY034945 Secale cereale
GWHGASIY035000 Secale cereale
GWHGASIY035002 Secale cereale
GWHGAZTO006973 Oryza alta
GWHGAZTO006982 Oryza alta
GWHGAZTO059309 Oryza alta
GWHGAZTO059312 Oryza alta
Horvu_MOREX_3H01G116000 Hordeum vulgare
Horvu_MOREX_3H01G663200 Hordeum vulgare
Horvu_MOREX_3H01G663300 Hordeum vulgare
Horvu_MOREX_3H01G663400 Hordeum vulgare
Horvu_MOREX_6H01G040900 Hordeum vulgare
HPP92_013976 Vanilla planifolia
HPP92_016054 Vanilla planifolia
Ma03_g08560 Musa acuminata
Ma09_g16200 Musa acuminata
Mapoly0010s0019 Marchantia polymorpha
MBI13_g23553_MAGBIO Magnolia biondii
MBI13_g41607_MAGBIO Magnolia biondii
Misin01G345200 Miscanthus sinensis
Misin05G412200 Miscanthus sinensis
Misin06G398500 Miscanthus sinensis
Misin06G398600 Miscanthus sinensis
Misin06G399100 Miscanthus sinensis
Misin06G416000 Miscanthus sinensis
OB01G53350 Oryza brachyantha
OB01G53360 Oryza brachyantha
Os01g0953600 Oryza sativa ssp. japonica
Os01g0954000 Oryza sativa ssp. japonica
OsKitaake01g475500 Oryza sativa Kitaake
OsKitaake01g475700 Oryza sativa Kitaake
OsR498G0102713200.01 Oryza sativa ssp. indica
OsR498G0102714500.01 Oryza sativa ssp. indica
Ot_Chr3_g09969 Oropetium thomaeum
Ot_Chr3_g09971 Oropetium thomaeum
p5.00_sc00086_p0029 Elaeis guineensis
p5.00_sc00086_p0030 Elaeis guineensis
p5.00_sc00086_p0031 Elaeis guineensis
Pahal.5G015800 Panicum hallii
Pahal.5G016200 Panicum hallii
Pahal.9G457300 Panicum hallii
PH02Gene15884 Phyllostachys edulis
PH02Gene21061 Phyllostachys edulis
PH02Gene21062 Phyllostachys edulis
PH02Gene21063 Phyllostachys edulis
PH02Gene30015 Phyllostachys edulis
Potri.001G028000 Populus trichocarpa
Potri.003G195700 Populus trichocarpa
Potri.003G195900 Populus trichocarpa
SEGI_21732 Sequoiadendron giganteum
SEGI_28470 Sequoiadendron giganteum
SEGI_38954 Sequoiadendron giganteum
Seita.5G455900 Setaria italica
Seita.5G456100 Setaria italica
Seita.9G396700 Setaria italica
Sevir.5G462600 Setaria viridis
Sevir.5G462800 Setaria viridis
Sevir.9G399600 Setaria viridis
SMO196G0101 Selaginella moellendorffii
Sobic.003G429000 Sorghum bicolor
Sobic.003G429200 Sorghum bicolor
Sobic.003G429300 Sorghum bicolor
Solyc01g096420.3 Solanum lycopersicum
Solyc01g096430.4 Solanum lycopersicum
Spipo6G0009100 Spirodela polyrhiza
Sspon.03G0026400-1B Saccharum spontaneum
Sspon.03G0026400-1P Saccharum spontaneum
Sspon.03G0026400-2C Saccharum spontaneum
Sspon.03G0026400-3D Saccharum spontaneum
Sspon.03G0037820-1C Saccharum spontaneum
Sspon.03G0037820-1P Saccharum spontaneum
Sspon.03G0037820-2D Saccharum spontaneum
TraesCS3A03G0224200 Triticum aestivum
TraesCS3A03G1150700 Triticum aestivum
TraesCS3A03G1151400 Triticum aestivum
TraesCS3A03G1152000 Triticum aestivum
TraesCS3A03G1152400 Triticum aestivum
TraesCS3B03G0275900 Triticum aestivum
TraesCS3B03G1371900 Triticum aestivum
TraesCS3B03G1372000 Triticum aestivum
TraesCS3B03G1372800 Triticum aestivum
TraesCS3B03G1374000 Triticum aestivum
TraesCS3D03G0214200 Triticum aestivum
TraesCS3D03G0214600 Triticum aestivum
TraesCS3D03G0214900 Triticum aestivum
TraesCS3D03G1095600 Triticum aestivum
TraesCS3D03G1095700 Triticum aestivum
TraesCS3D03G1095900 Triticum aestivum
TraesCS3D03G1096100 Triticum aestivum
TraesCS3D03G1096800 Triticum aestivum
TraesCS6A03G0075200 Triticum aestivum
TraesCS6B03G0108200 Triticum aestivum
TraesCS6B03G0108900 Triticum aestivum
TraesCS6D03G0078000 Triticum aestivum
TRIDC2BG009020 Triticum dicoccoides
TRIDC3AG012460 Triticum dicoccoides
TRIDC3AG070120 Triticum dicoccoides
TRIDC3AG070160 Triticum dicoccoides
TRIDC3AG070190 Triticum dicoccoides
TRIDC3BG016720 Triticum dicoccoides
TRIDC3BG079450 Triticum dicoccoides
TRIDC3BG079470 Triticum dicoccoides
TRIDC6AG004080 Triticum dicoccoides
TRIDC6BG005800 Triticum dicoccoides
TRITD3Av1G030970 Triticum turgidum
TRITD3Av1G270440 Triticum turgidum
TRITD3Av1G270470 Triticum turgidum
TRITD3Av1G270530 Triticum turgidum
TRITD3Bv1G037210 Triticum turgidum
TRITD3Bv1G265460 Triticum turgidum
TRITD3Bv1G265490 Triticum turgidum
TRITD3Bv1G265610 Triticum turgidum
TRITD3Bv1G265660 Triticum turgidum
TRITD3Bv1G265690 Triticum turgidum
TRITD6Bv1G009070 Triticum turgidum
TRITD6Bv1G009130 Triticum turgidum
V3.Lp_chr3_0G24516 Lolium perenne
V3.Lp_chr3_0G24518 Lolium perenne
V3.Lp_chr3_0G24522 Lolium perenne
V3.Lp_chr3_0G24538 Lolium perenne
Zjn_sc00002.1.g00890.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00034.1.g01050.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00034.1.g01070.1.am.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc00034.1.g01080.1.am.mkhc Zoysia japonica ssp. nagirizaki
Zjn_sc13094.1.g00020.1.sm.mk Zoysia japonica ssp. nagirizaki
Zm00001eb140660 Zea mays B73
Zm00001eb362760 Zea mays B73
Zm00001eb394340 Zea mays B73
Zm00007a00021623 Zea mays B104
Zm00007a00026073 Zea mays B104
Zm00007a00041250 Zea mays B104
Zosma03g17730 Zostera marina

User provided reference genes

Program Settings