Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_368.1781 Anthoceros agrestis
Aco005066 Ananas comosus
Aco007446 Ananas comosus
Aco008693 Ananas comosus
Aco011200 Ananas comosus
Aco014083 Ananas comosus
AET4Gv20560400 Aegilops tauschii
AET5Gv20142700 Aegilops tauschii
AET5Gv20879400 Aegilops tauschii
AET5Gv20985800 Aegilops tauschii
AET7Gv21136700 Aegilops tauschii
Asa1G04559 Allium sativum
Asa1G04565 Allium sativum
Asa1G04572 Allium sativum
Asa1G04576 Allium sativum
Asa1G04577 Allium sativum
Asa1G04578 Allium sativum
Asa1G04579 Allium sativum
Asa1G04580 Allium sativum
Asa1G04581 Allium sativum
Asa1G04777 Allium sativum
Asa2G01095 Allium sativum
Asa4G02407 Allium sativum
Asa4G03971 Allium sativum
Asa6G00354 Allium sativum
Asa7G01543 Allium sativum
Asa7G01544 Allium sativum
AT2G39220 Arabidopsis thaliana
AT3G54950 Arabidopsis thaliana
AT3G63200 Arabidopsis thaliana
AT4G29800 Arabidopsis thaliana
ATR0100G014 Amborella trichopoda
ATR0115G005 Amborella trichopoda
ATR0626G403 Amborella trichopoda
ATR1098G112 Amborella trichopoda
Bradi1g06610 Brachypodium distachyon
Bradi1g13940 Brachypodium distachyon
Bradi1g32620 Brachypodium distachyon
Bradi1g67810 Brachypodium distachyon
Bradi4g01990 Brachypodium distachyon
CALSI_Maker00003695 Calamus simplicifolius
CALSI_Maker00021347 Calamus simplicifolius
CALSI_Maker00021656 Calamus simplicifolius
CALSI_Maker00022419 Calamus simplicifolius
CALSI_Maker00025098 Calamus simplicifolius
CALSI_Maker00027479 Calamus simplicifolius
CALSI_Maker00028580 Calamus simplicifolius
CALSI_Maker00034078 Calamus simplicifolius
CALSI_Maker00042798 Calamus simplicifolius
CALSI_Maker00045960 Calamus simplicifolius
CALSI_Maker00048229 Calamus simplicifolius
CDE02G2948 Ceratophyllum demersum
CDE04G0881 Ceratophyllum demersum
CDE04G1818 Ceratophyllum demersum
CDE05G2019 Ceratophyllum demersum
CDE05G2731 Ceratophyllum demersum
CDE07G0356 Ceratophyllum demersum
DDU123G0021 Dioscorea dumetorum
DDU256G0621 Dioscorea dumetorum
DDU272G0290 Dioscorea dumetorum
DDU479G0307 Dioscorea dumetorum
DDU550G0111 Dioscorea dumetorum
DDU565G0021 Dioscorea dumetorum
DDU826G0003 Dioscorea dumetorum
DDU914G0004 Dioscorea dumetorum
Dexi2A01G0002870 Digitaria exilis
Dexi2B01G0002660 Digitaria exilis
Dexi2B01G0002670 Digitaria exilis
Dexi3A01G0035150 Digitaria exilis
Dexi3B01G0036990 Digitaria exilis
Dexi4A01G0020720 Digitaria exilis
Dexi4B01G0020130 Digitaria exilis
Dexi9A01G0006320 Digitaria exilis
Dexi9A01G0015550 Digitaria exilis
Dexi9A01G0015570 Digitaria exilis
Dexi9A01G0015580 Digitaria exilis
Dexi9A01G0041080 Digitaria exilis
Dexi9B01G0006000 Digitaria exilis
Dexi9B01G0012900 Digitaria exilis
Dexi9B01G0012910 Digitaria exilis
Dexi9B01G0012930 Digitaria exilis
Dexi9B01G0040190 Digitaria exilis
EJB05_00386 Eragrostis curvula
EJB05_05481 Eragrostis curvula
EJB05_05483 Eragrostis curvula
EJB05_05486 Eragrostis curvula
EJB05_07309 Eragrostis curvula
EJB05_14644 Eragrostis curvula
EJB05_14649 Eragrostis curvula
EJB05_14650 Eragrostis curvula
EJB05_14653 Eragrostis curvula
EJB05_41946 Eragrostis curvula
EJB05_52230 Eragrostis curvula
EJB05_56276 Eragrostis curvula
evm.TU.AsparagusV1_04.1392.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_04.20.V1.1 Asparagus officinalis
evm.TU.AsparagusV1_06.21.V1.1 Asparagus officinalis
Glyma.02G147100 Glycine max
Glyma.03G154200 Glycine max
Glyma.09G022000 Glycine max
Glyma.10G026800 Glycine max
Glyma.10G211300 Glycine max
Glyma.15G128300 Glycine max
Glyma.19G156700 Glycine max
Glyma.20G179600 Glycine max
GWHGAORA002718 Cenchrus purpureus
GWHGAORA009939 Cenchrus purpureus
GWHGAORA009957 Cenchrus purpureus
GWHGAORA014557 Cenchrus purpureus
GWHGAORA014558 Cenchrus purpureus
GWHGAORA018941 Cenchrus purpureus
GWHGAORA018942 Cenchrus purpureus
GWHGAORA018943 Cenchrus purpureus
GWHGAORA018945 Cenchrus purpureus
GWHGAORA018960 Cenchrus purpureus
GWHGAORA018961 Cenchrus purpureus
GWHGAORA018963 Cenchrus purpureus
GWHGAORA019841 Cenchrus purpureus
GWHGAORA019871 Cenchrus purpureus
GWHGAORA026968 Cenchrus purpureus
GWHGAORA029116 Cenchrus purpureus
GWHGAORA034708 Cenchrus purpureus
GWHGAORA046652 Cenchrus purpureus
GWHGAORA050694 Cenchrus purpureus
GWHGAORA051654 Cenchrus purpureus
GWHGAORA051656 Cenchrus purpureus
GWHGAORA051657 Cenchrus purpureus
GWHGAORA051677 Cenchrus purpureus
GWHGAORA051678 Cenchrus purpureus
GWHGAORA055332 Cenchrus purpureus
GWHGAORA057350 Cenchrus purpureus
GWHGAORA063933 Cenchrus purpureus
GWHGASIY022516 Secale cereale
GWHGASIY024423 Secale cereale
GWHGASIY024442 Secale cereale
GWHGASIY026674 Secale cereale
GWHGASIY028114 Secale cereale
GWHGASIY028708 Secale cereale
GWHGASIY028710 Secale cereale
GWHGASIY028721 Secale cereale
GWHGASIY038408 Secale cereale
GWHGASIY040868 Secale cereale
GWHGAZTO001582 Oryza alta
GWHGAZTO015854 Oryza alta
GWHGAZTO023152 Oryza alta
GWHGAZTO025683 Oryza alta
GWHGAZTO027004 Oryza alta
GWHGAZTO042007 Oryza alta
GWHGAZTO042015 Oryza alta
GWHGAZTO042016 Oryza alta
GWHGAZTO042017 Oryza alta
GWHGAZTO067672 Oryza alta
GWHGAZTO073749 Oryza alta
GWHGAZTO075630 Oryza alta
GWHGAZTO076885 Oryza alta
GWHGAZTO088856 Oryza alta
GWHGAZTO089713 Oryza alta
Horvu_MOREX_4H01G347500 Hordeum vulgare
Horvu_MOREX_5H01G063300 Hordeum vulgare
Horvu_MOREX_5H01G549200 Hordeum vulgare
Horvu_MOREX_5H01G603800 Hordeum vulgare
Horvu_MOREX_7H01G632400 Hordeum vulgare
HPP92_012193 Vanilla planifolia
HPP92_012664 Vanilla planifolia
HPP92_013910 Vanilla planifolia
HPP92_013991 Vanilla planifolia
HPP92_015682 Vanilla planifolia
HPP92_026342 Vanilla planifolia
HPP92_026343 Vanilla planifolia
Ma00_g04940 Musa acuminata
Ma02_g03300 Musa acuminata
Ma02_g14170 Musa acuminata
Ma02_g14890 Musa acuminata
Ma04_g27440 Musa acuminata
Ma04_g38270 Musa acuminata
Ma05_g02290 Musa acuminata
Ma05_g03610 Musa acuminata
Ma05_g20830 Musa acuminata
Ma05_g28990 Musa acuminata
Ma06_g33000 Musa acuminata
Ma08_g02760 Musa acuminata
Ma08_g06960 Musa acuminata
Ma08_g14850 Musa acuminata
Ma08_g15810 Musa acuminata
Ma11_g00470 Musa acuminata
Ma11_g24090 Musa acuminata
Mapoly0123s0003 Marchantia polymorpha
MBI02_g15888_MAGBIO Magnolia biondii
MBI02_g36733_MAGBIO Magnolia biondii
MBI02_g36734_MAGBIO Magnolia biondii
MBI06_g24642_MAGBIO Magnolia biondii
MBI10_g18715_MAGBIO Magnolia biondii
Misin01G059700 Miscanthus sinensis
Misin01G140200 Miscanthus sinensis
Misin01G140400 Miscanthus sinensis
Misin01G413300 Miscanthus sinensis
Misin02G044100 Miscanthus sinensis
Misin02G134700 Miscanthus sinensis
Misin02G134800 Miscanthus sinensis
Misin02G395300 Miscanthus sinensis
Misin03G015800 Miscanthus sinensis
Misin04G039000 Miscanthus sinensis
Misin07G073100 Miscanthus sinensis
Misin14G161000 Miscanthus sinensis
Misin15G174800 Miscanthus sinensis
Misin18G227700 Miscanthus sinensis
Misin19G243300 Miscanthus sinensis
MisinT050400 Miscanthus sinensis
OB03G21130 Oryza brachyantha
OB03G34980 Oryza brachyantha
OB03G43360 Oryza brachyantha
OB03G45860 Oryza brachyantha
OB06G32350 Oryza brachyantha
OB07G12220 Oryza brachyantha
OB12G25230 Oryza brachyantha
Os03g0254400 Oryza sativa ssp. japonica
Os03g0640000 Oryza sativa ssp. japonica
Os03g0784100 Oryza sativa ssp. japonica
Os06g0677000 Oryza sativa ssp. japonica
Os07g0144500 Oryza sativa ssp. japonica
Os12g0611300 Oryza sativa ssp. japonica
OsKitaake03g114800 Oryza sativa Kitaake
OsKitaake03g267400 Oryza sativa Kitaake
OsKitaake03g364400 Oryza sativa Kitaake
OsKitaake06g251900 Oryza sativa Kitaake
OsKitaake07g031300 Oryza sativa Kitaake
OsKitaake12g208600 Oryza sativa Kitaake
OsR498G0305597100.01 Oryza sativa ssp. indica
OsR498G0306639200.01 Oryza sativa ssp. indica
OsR498G0307166200.01 Oryza sativa ssp. indica
OsR498G0613171800.01 Oryza sativa ssp. indica
OsR498G0713501900.01 Oryza sativa ssp. indica
OsR498G1222088000.01 Oryza sativa ssp. indica
Ot_Chr10_g18225 Oropetium thomaeum
Ot_Chr2_g15596 Oropetium thomaeum
Ot_Chr4_g00730 Oropetium thomaeum
Ot_Chr4_g07777 Oropetium thomaeum
Ot_Chr4_g08379 Oropetium thomaeum
Ot_Chr4_g27667 Oropetium thomaeum
Ot_Chr7_g22526 Oropetium thomaeum
p5.00_sc00010_p0070 Elaeis guineensis
p5.00_sc00022_p0033 Elaeis guineensis
p5.00_sc00030_p0119 Elaeis guineensis
p5.00_sc00044_p0037 Elaeis guineensis
p5.00_sc00071_p0113 Elaeis guineensis
p5.00_sc00079_p0005 Elaeis guineensis
p5.00_sc00205_p0006 Elaeis guineensis
p5.00_sc00208_p0004 Elaeis guineensis
Pahal.2G023900 Panicum hallii
Pahal.3G495100 Panicum hallii
Pahal.4G046000 Panicum hallii
Pahal.9G062100 Panicum hallii
Pahal.9G156700 Panicum hallii
Pahal.9G156900 Panicum hallii
Pahal.9G157000 Panicum hallii
Pahal.9G528400 Panicum hallii
PH02Gene07616 Phyllostachys edulis
PH02Gene08262 Phyllostachys edulis
PH02Gene09616 Phyllostachys edulis
PH02Gene13728 Phyllostachys edulis
PH02Gene15224 Phyllostachys edulis
PH02Gene19332 Phyllostachys edulis
PH02Gene20434 Phyllostachys edulis
PH02Gene29614 Phyllostachys edulis
PH02Gene32311 Phyllostachys edulis
PH02Gene32570 Phyllostachys edulis
PH02Gene35900 Phyllostachys edulis
PH02Gene36832 Phyllostachys edulis
PH02Gene43008 Phyllostachys edulis
PH02Gene46006 Phyllostachys edulis
Potri.002G052600 Populus trichocarpa
Potri.005G210100 Populus trichocarpa
Potri.008G040500 Populus trichocarpa
Potri.010G221700 Populus trichocarpa
Potri.012G123900 Populus trichocarpa
Potri.015G122700 Populus trichocarpa
Pp3c5_9670 Physcomitrium patens
Pp3c6_20800 Physcomitrium patens
SEGI_20810 Sequoiadendron giganteum
SEGI_39545 Sequoiadendron giganteum
Seita.2G030200 Setaria italica
Seita.3G386800 Setaria italica
Seita.4G263000 Setaria italica
Seita.9G065800 Setaria italica
Seita.9G159300 Setaria italica
Seita.9G159500 Setaria italica
Seita.9G159600 Setaria italica
Seita.9G466200 Setaria italica
Sevir.2G034700 Setaria viridis
Sevir.3G402900 Setaria viridis
Sevir.4G275800 Setaria viridis
Sevir.9G065300 Setaria viridis
Sevir.9G157700 Setaria viridis
Sevir.9G157900 Setaria viridis
Sevir.9G158000 Setaria viridis
Sevir.9G469800 Setaria viridis
SMO334G0008 Selaginella moellendorffii
SMO367G0092 Selaginella moellendorffii
Sobic.001G067500 Sorghum bicolor
Sobic.001G157700 Sorghum bicolor
Sobic.001G157900 Sorghum bicolor
Sobic.001G158200 Sorghum bicolor
Sobic.001G433900 Sorghum bicolor
Sobic.002G031800 Sorghum bicolor
Sobic.008G166050 Sorghum bicolor
Sobic.010G228100 Sorghum bicolor
Solyc05g056030.3 Solanum lycopersicum
Solyc09g065240.3 Solanum lycopersicum
Solyc10g078530.2 Solanum lycopersicum
Solyc10g080690.2 Solanum lycopersicum
Spipo13G0047800 Spirodela polyrhiza
Spipo1G0000800 Spirodela polyrhiza
Spipo22G0000500 Spirodela polyrhiza
Spipo5G0037600 Spirodela polyrhiza
Sspon.01G0006720-1A Saccharum spontaneum
Sspon.01G0006720-1P Saccharum spontaneum
Sspon.01G0006720-2C Saccharum spontaneum
Sspon.01G0006720-3D Saccharum spontaneum
Sspon.01G0023910-1A Saccharum spontaneum
Sspon.01G0023910-1P Saccharum spontaneum
Sspon.01G0023910-2B Saccharum spontaneum
Sspon.01G0023910-3C Saccharum spontaneum
Sspon.01G0023910-4D Saccharum spontaneum
Sspon.01G0023930-1A Saccharum spontaneum
Sspon.01G0023930-1P Saccharum spontaneum
Sspon.01G0023930-2B Saccharum spontaneum
Sspon.01G0023930-3C Saccharum spontaneum
Sspon.01G0029560-1A Saccharum spontaneum
Sspon.01G0029560-1P Saccharum spontaneum
Sspon.01G0029560-2B Saccharum spontaneum
Sspon.01G0029560-2P Saccharum spontaneum
Sspon.01G0029560-3D Saccharum spontaneum
Sspon.01G0029560-3P Saccharum spontaneum
Sspon.01G0060780-1D Saccharum spontaneum
Sspon.02G0024270-1A Saccharum spontaneum
Sspon.02G0024270-1P Saccharum spontaneum
Sspon.02G0024270-2C Saccharum spontaneum
Sspon.02G0031010-1A Saccharum spontaneum
Sspon.02G0031010-1T Saccharum spontaneum
Sspon.02G0031010-2C Saccharum spontaneum
Sspon.02G0031010-3D Saccharum spontaneum
Sspon.02G0042550-1B Saccharum spontaneum
Sspon.02G0058550-1D Saccharum spontaneum
Sspon.08G0003900-1A Saccharum spontaneum
Sspon.08G0003900-2B Saccharum spontaneum
Sspon.08G0003900-3C Saccharum spontaneum
Sspon.08G0003900-4D Saccharum spontaneum
TraesCS4A03G0169500 Triticum aestivum
TraesCS4B03G0606000 Triticum aestivum
TraesCS4D03G0537100 Triticum aestivum
TraesCS5A03G0119300 Triticum aestivum
TraesCS5A03G1001400 Triticum aestivum
TraesCS5A03G1001800 Triticum aestivum
TraesCS5B03G0132000 Triticum aestivum
TraesCS5B03G0950800 Triticum aestivum
TraesCS5B03G1047500 Triticum aestivum
TraesCS5B03G1047900 Triticum aestivum
TraesCS5D03G0142500 Triticum aestivum
TraesCS5D03G0864100 Triticum aestivum
TraesCS5D03G0948400 Triticum aestivum
TraesCS5D03G0948900 Triticum aestivum
TraesCS7A03G1127500 Triticum aestivum
TraesCS7B03G0981000 Triticum aestivum
TraesCS7D03G1073600 Triticum aestivum
TRIDC1BG051660 Triticum dicoccoides
TRIDC4AG011370 Triticum dicoccoides
TRIDC4BG039050 Triticum dicoccoides
TRIDC5AG007250 Triticum dicoccoides
TRIDC5AG055030 Triticum dicoccoides
TRIDC5AG061080 Triticum dicoccoides
TRIDC5AG061110 Triticum dicoccoides
TRIDC5BG008710 Triticum dicoccoides
TRIDC5BG045330 Triticum dicoccoides
TRIDC5BG059020 Triticum dicoccoides
TRIDC5BG065150 Triticum dicoccoides
TRIDC7AG003710 Triticum dicoccoides
TRIDC7AG064880 Triticum dicoccoides
TRIDC7BG058260 Triticum dicoccoides
TRITD4Bv1G134180 Triticum turgidum
TRITD5Av1G020450 Triticum turgidum
TRITD5Av1G199220 Triticum turgidum
TRITD5Av1G214590 Triticum turgidum
TRITD5Av1G214620 Triticum turgidum
TRITD5Bv1G021220 Triticum turgidum
TRITD5Bv1G193870 Triticum turgidum
TRITD5Bv1G210870 Triticum turgidum
TRITD5Bv1G210890 Triticum turgidum
TRITD7Av1G247130 Triticum turgidum
TRITD7Bv1G195100 Triticum turgidum
V3.Lp_chr4_0G23082 Lolium perenne
V3.Lp_chr4_0G4272 Lolium perenne
V3.Lp_chr4_0G9176 Lolium perenne
V3.Lp_chr5_0G2130 Lolium perenne
V3.Lp_chr7_0.1G11242 Lolium perenne
V3.Lp_chr7_0.1G11244 Lolium perenne
V3.Lp_chr7_0.1G11258 Lolium perenne
Zjn_sc00003.1.g06130.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00008.1.g02620.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00013.1.g06220.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00014.1.g06540.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00019.1.g02900.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00019.1.g02930.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00065.1.g01480.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00065.1.g01500.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00088.1.g01460.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00105.1.g01370.1.am.mk Zoysia japonica ssp. nagirizaki
Zjn_sc00148.1.g00280.1.sm.mk Zoysia japonica ssp. nagirizaki
Zjn_sc05399.1.g00010.1.am.mk Zoysia japonica ssp. nagirizaki
Zm00001eb011000 Zea mays B73
Zm00001eb050700 Zea mays B73
Zm00001eb050710 Zea mays B73
Zm00001eb059800 Zea mays B73
Zm00001eb135980 Zea mays B73
Zm00001eb218760 Zea mays B73
Zm00001eb224740 Zea mays B73
Zm00001eb299880 Zea mays B73
Zm00001eb387900 Zea mays B73
Zm00007a00002273 Zea mays B104
Zm00007a00011351 Zea mays B104
Zm00007a00019566 Zea mays B104
Zm00007a00022214 Zea mays B104
Zm00007a00028408 Zea mays B104
Zm00007a00029049 Zea mays B104
Zm00007a00040276 Zea mays B104
Zm00007a00051182 Zea mays B104
Zm00007a00051983 Zea mays B104
Zosma01g24740 Zostera marina
Zosma01g32180 Zostera marina
Zosma03g34790 Zostera marina
Zosma05g20720 Zostera marina
Zosma256g00050 Zostera marina

User provided reference genes

Program Settings