Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Horvu_MOREX_Un01G085300 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Horvu_MOREX_Un01G091300 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Horvu_MOREX_Un01G095500 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Horvu_MOREX_Un01G095900 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Horvu_MOREX_Un01G097300 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_chr3_0G14952 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_chr3_0G14958 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_chr3_0G4 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_chr7_0.1G1206 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_scaffold_4807G22 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
V3.Lp_scaffold_891G22 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
OsKitaake01g066164 Oryza sativa Kitaake HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
OsKitaake08g086500 Oryza sativa Kitaake HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
OsKitaake10g166100 Oryza sativa Kitaake HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
OsKitaakeM051205 Oryza sativa Kitaake HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Pahal.1G216500 Panicum hallii HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
Pahal.4G130300 Panicum hallii HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS1B03G0672900 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS2B03G0864400 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS5D03G1006800 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS5D03G1008600 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS6B03G0737900 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS7D03G0575700 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS7D03G0724000 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCSU03G0470000 Triticum aestivum HOM05M006446 ORTHO05M008014 1.8e-40 167.9 80 100.0
TraesCS3B03G0452900 Triticum aestivum HOM05M006446 ORTHO05M008014 3.1e-40 167.2 80 98.8
TraesCS2B03G0941000 Triticum aestivum HOM05M006446 ORTHO05M008014 4.1e-40 166.8 80 98.8
TRITD3Bv1G255460 Triticum turgidum HOM05M006446 ORTHO05M008014 4.1e-40 166.8 80 98.8
TRITD4Av1G059280 Triticum turgidum HOM05M006446 ORTHO05M008014 4.1e-40 166.8 80 98.8
V3.Lp_chr7_0.1G8380 Lolium perenne HOM05M006446 ORTHO05M008014 5.3e-40 166.4 80 98.8
Pahal.3G366000 Panicum hallii HOM05M006446 ORTHO05M008014 5.3e-40 166.4 80 98.8
TRITD1Bv1G012150 Triticum turgidum HOM05M006446 ORTHO05M008014 5.3e-40 166.4 80 98.8
TRITD2Bv1G157630 Triticum turgidum HOM05M006446 ORTHO05M008014 5.3e-40 166.4 80 98.8
TRITD1Bv1G012190 Triticum turgidum HOM05M006446 ORTHO05M008014 6.9e-40 166.0 80 98.8
Horvu_MOREX_Un01G103100 Hordeum vulgare HOM05M006446 ORTHO05M008014 9.1e-40 165.6 80 98.8
TraesCS1A03G0846900 Triticum aestivum HOM05M006446 ORTHO05M008014 9.1e-40 165.6 80 98.8
TraesCS2D03G0545900 Triticum aestivum HOM05M006446 ORTHO05M008014 9.1e-40 165.6 80 98.8
Pahal.9G287100 Panicum hallii HOM05M006446 ORTHO05M008014 1.5e-39 164.9 80 98.8
TraesCS1D03G0472500 Triticum aestivum HOM05M006446 ORTHO05M008014 1.5e-39 164.9 80 97.5
TraesCS3B03G1204200 Triticum aestivum HOM05M006446 ORTHO05M008014 1.5e-39 164.9 80 98.8
TraesCS7B03G1064000 Triticum aestivum HOM05M006446 ORTHO05M008014 1.5e-39 164.9 80 98.8
TRITD3Av1G256800 Triticum turgidum HOM05M006446 ORTHO05M008014 1.5e-39 164.9 80 98.8
Pahal.9G286650 Panicum hallii HOM05M006446 ORTHO05M008014 2.6e-39 164.1 78 98.7
Horvu_MOREX_2H01G296700 Hordeum vulgare HOM05M006446 ORTHO05M008014 4.5e-39 163.3 80 96.2
TRITD6Bv1G131260 Triticum turgidum HOM05M006446 ORTHO05M008014 7.7e-39 162.5 80 97.5
TraesCS2A03G0560700 Triticum aestivum HOM05M006446 ORTHO05M008014 1.3e-38 161.8 80 96.2
TraesCS7B03G1067400 Triticum aestivum HOM05M006446 ORTHO05M008014 1.3e-38 161.8 80 96.2
TRITD6Av1G022020 Triticum turgidum HOM05M006446 ORTHO05M008014 1.3e-38 161.8 80 98.8
TRITD7Bv1G038040 Triticum turgidum HOM05M006446 ORTHO05M008014 1.3e-38 161.8 80 96.2
Horvu_MOREX_Un01G093900 Hordeum vulgare HOM05M006446 ORTHO05M008014 2.9e-38 160.6 76 100.0
Horvu_MOREX_Un01G096300 Hordeum vulgare HOM05M006446 ORTHO05M008014 2.9e-38 160.6 76 100.0
TRITD2Av1G120680 Triticum turgidum HOM05M006446 ORTHO05M008014 3.8e-38 160.2 80 96.2
TraesCS6D03G0403000 Triticum aestivum HOM05M006446 ORTHO05M008014 6.5e-38 159.5 80 95.0
TraesCS5B03G0649700 Triticum aestivum HOM05M006446 ORTHO05M008014 8.5e-38 159.1 80 95.0
TRITD5Bv1G143210 Triticum turgidum HOM05M006446 ORTHO05M008014 8.5e-38 159.1 80 95.0
OB03G31920 Oryza brachyantha HOM05M006446 ORTHO05M008014 1.9e-37 157.9 77 97.4
V3.Lp_chr7_0.1G7970 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-35 151.4 74 97.3
TRITD4Av1G093710 Triticum turgidum HOM05M006446 ORTHO05M008014 5.1e-35 149.8 80 92.5
TRITD6Av1G030540 Triticum turgidum HOM05M006446 ORTHO05M008014 1.5e-34 148.3 70 98.6
Horvu_MOREX_1H01G203400 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.7e-25 118.2 82 75.6
Pahal.9G361600 Panicum hallii HOM05M006446 ORTHO05M008014 1.6e-23 111.7 52 98.1
Asa6G03265 Allium sativum HOM05M006446 ORTHO05M008014 1.5e-21 105.1 56 89.3
V3.Lp_scaffold_4559G2 Lolium perenne HOM05M006446 ORTHO05M008014 1.8e-19 98.2 44 100.0
TRITD2Av1G120630 Triticum turgidum HOM05M005811 ORTHO05M008014 1.3e-17 92.0 47 93.6
Aco022979 Ananas comosus HOM05M006446 ORTHO05M008014 4.1e-16 87.0 40 97.5
Pahal.8G073200 Panicum hallii HOM05M006446 ORTHO05M008014 2.7e-15 84.3 80 58.8
V3.Lp_chr4_0G25520 Lolium perenne HOM05M006446 ORTHO05M008014 1.9e-13 78.2 38 100.0
Horvu_MOREX_4H01G182800 Hordeum vulgare HOM05M006446 ORTHO05M008014 1.6e-12 75.1 37 91.9
Sspon.05G0038980-1D Saccharum spontaneum HOM05M006446 ORTHO05M008014 1.0e-11 72.4 52 73.1
Glyma.20G027700 Glycine max HOM05M006446 ORTHO05M008014 3.4e-10 67.4 48 64.6
Glyma.05G084375 Glycine max HOM05M005811 ORTHO05M006957 8.6e-06 52.8 55 52.7


User provided reference genes

Program Settings