Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr2_0G12978 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G12988 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13000 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13062 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13072 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13076 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13084 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13102 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13112 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13122 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13132 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13138 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13156 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13168 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13180 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13188 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13194 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13206 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13218 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13234 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13244 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr2_0G13288 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr3_0G2818 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr3_0G9678 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_chr7_0.1G6012 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_1606G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_1693G6 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_1695G12 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2066G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2216G6 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2432G18 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2432G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2958G18 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_2958G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_321G12 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_321G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_321G22 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_4032G16 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_4032G4 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_4178G12 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_4178G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_4643G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5130G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5549G10 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5555G16 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5555G6 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5745G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5765G12 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5765G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_593G2 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_5947G10 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_7512G8 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_8367G10 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_8367G20 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_8613G14 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_8613G4 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_9092G10 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
V3.Lp_scaffold_9092G20 Lolium perenne HOM05M006657 ORTHO05M008357 7.3e-18 92.0 46 100.0
HPP92_007079 Vanilla planifolia HOM05M006657 ORTHO05M008357 9.9e-15 81.6 46 89.1
TRITD1Av1G000970 Triticum turgidum HOM05M006657 ORTHO05M008357 2.2e-14 80.5 40 100.0
TRITD1Bv1G039980 Triticum turgidum HOM05M006657 ORTHO05M008357 6.4e-14 79.0 39 100.0
TRITD1Bv1G173740 Triticum turgidum HOM05M006657 ORTHO05M008357 6.4e-14 79.0 39 100.0
TRITD1Bv1G173780 Triticum turgidum HOM05M006657 ORTHO05M008357 6.4e-14 79.0 39 100.0
TRITD4Av1G181570 Triticum turgidum HOM05M006657 ORTHO05M008357 6.4e-14 79.0 39 100.0
TRITD6Bv1G041250 Triticum turgidum HOM05M006657 ORTHO05M008357 6.4e-14 79.0 39 100.0
V3.Lp_chr5_0G17876 Lolium perenne HOM05M006657 ORTHO05M008357 3.2e-13 76.6 41 95.1
TRITD1Av1G001100 Triticum turgidum HOM05M006657 ORTHO05M008357 3.2e-13 76.6 39 97.4
TRITD4Av1G220780 Triticum turgidum HOM05M006657 ORTHO05M008357 7.1e-13 75.5 39 97.4
V3.Lp_chr5_0G17896 Lolium perenne HOM05M006657 ORTHO05M008357 3.5e-12 73.2 41 92.7


User provided reference genes

Program Settings