Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_scaffold_2425G2 Lolium perenne HOM05M000006 ORTHO05M000001 3.6e-64 247.3 122 100.0
V3.Lp_chr6_0G11812 Lolium perenne HOM05M000006 ORTHO05M000001 2.4e-47 191.4 97 93.8
V3.Lp_chr5_0G4974 Lolium perenne HOM05M000006 ORTHO05M000001 5.2e-47 190.3 97 92.8
V3.Lp_chr3_0G498 Lolium perenne HOM05M000006 ORTHO05M000001 2.0e-46 188.3 97 92.8
V3.Lp_chr3_0G832 Lolium perenne HOM05M000006 ORTHO05M000001 2.0e-46 188.3 97 92.8
V3.Lp_chr7_0.1G8284 Lolium perenne HOM05M000031 ORTHO05M000572 2.0e-46 188.3 99 90.9
V3.Lp_chr2_0G11404 Lolium perenne HOM05M000006 ORTHO05M000001 5.8e-46 186.8 94 93.6
V3.Lp_chr3_0G1080 Lolium perenne HOM05M000006 ORTHO05M000001 5.8e-46 186.8 94 93.6
V3.Lp_chr6_0G20186 Lolium perenne HOM05M000006 ORTHO05M000001 5.8e-46 186.8 94 93.6
V3.Lp_chr2_0G18160 Lolium perenne HOM05M000006 ORTHO05M000001 9.9e-46 186.0 94 93.6
V3.Lp_chr5_0G6306 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-45 185.7 94 92.6
V3.Lp_chr2_0G11572 Lolium perenne HOM05M000006 ORTHO05M000001 1.7e-45 185.3 96 91.7
V3.Lp_chr3_0G716 Lolium perenne HOM05M000006 ORTHO05M000001 1.7e-45 185.3 93 93.5
V3.Lp_chr1_0G3994 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr1_0G7438 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr1_0G7508 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr1_0G7628 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr2_0G9998 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1082 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1096 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1136 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G11700 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 91.5
V3.Lp_chr3_0G12832 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1358 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1360 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1418 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G1444 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G3706 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G406 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G608 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G614 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G636 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G688 Lolium perenne HOM05M000028 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G774 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G836 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr3_0G870 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr4_0G15664 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr4_0G15710 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr4_0G15772 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr5_0G6322 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr6_0G4158 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_scaffold_1645G2 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_scaffold_6289G4 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_scaffold_6294G4 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_scaffold_6621G2 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_scaffold_8328G4 Lolium perenne HOM05M000006 ORTHO05M000001 4.9e-45 183.7 94 92.6
V3.Lp_chr4_0G15702 Lolium perenne HOM05M000006 ORTHO05M000001 8.4e-45 183.0 94 90.4
V3.Lp_scaffold_3739G2 Lolium perenne HOM05M000006 ORTHO05M000001 8.4e-45 183.0 94 92.6
V3.Lp_chr3_0G1094 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-44 182.6 94 91.5
V3.Lp_chr4_0G15728 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-44 182.6 94 91.5
V3.Lp_chr4_0G24016 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-44 182.6 94 92.6
V3.Lp_chr5_0G13862 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-44 182.6 94 91.5
V3.Lp_chr1_0G2532 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-44 182.2 94 90.4
V3.Lp_chr5_0G7282 Lolium perenne HOM05M000006 ORTHO05M000001 3.2e-44 181.0 94 90.4
V3.Lp_scaffold_2690G4 Lolium perenne HOM05M000006 ORTHO05M000001 1.2e-43 179.1 93 91.4
V3.Lp_chr7_0.1G6246 Lolium perenne HOM05M000006 ORTHO05M000001 1.6e-43 178.7 94 90.4
V3.Lp_scaffold_1107G2 Lolium perenne HOM05M000006 ORTHO05M000001 1.6e-43 178.7 98 86.7
V3.Lp_chr1_0G2754 Lolium perenne HOM05M000006 ORTHO05M000001 4.6e-43 177.2 95 89.5
V3.Lp_chr2_0G9836 Lolium perenne HOM05M000006 ORTHO05M000001 4.6e-43 177.2 94 88.3
V3.Lp_chr6_0G7510 Lolium perenne HOM05M000006 ORTHO05M000001 6.0e-43 176.8 94 89.4
V3.Lp_chr3_0G606 Lolium perenne HOM05M000006 ORTHO05M000001 7.8e-43 176.4 89 93.3
V3.Lp_chr4_0G12790 Lolium perenne HOM05M000006 ORTHO05M000001 7.8e-43 176.4 94 89.4
V3.Lp_chr2_0G10162 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-42 175.6 94 89.4
V3.Lp_chr2_0G9250 Lolium perenne HOM05M000006 ORTHO05M000001 2.3e-42 174.9 94 88.3
V3.Lp_chr5_0G5942 Lolium perenne HOM05M000006 ORTHO05M000001 3.9e-42 174.1 96 85.4
V3.Lp_chr3_0G13790 Lolium perenne HOM05M000006 ORTHO05M000001 6.6e-42 173.3 85 96.5
V3.Lp_chr4_0G15622 Lolium perenne HOM05M000006 ORTHO05M000001 6.6e-42 173.3 91 90.1
V3.Lp_chr3_0G780 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-41 172.6 85 95.3
V3.Lp_chr6_0G13356 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-41 172.6 94 88.3
V3.Lp_chr2_0G10160 Lolium perenne HOM05M000006 ORTHO05M000001 4.3e-41 170.6 92 88.0
V3.Lp_chr1_0G7624 Lolium perenne HOM05M000006 ORTHO05M000001 1.2e-40 169.1 94 87.2
V3.Lp_chr3_0G534 Lolium perenne HOM05M000006 ORTHO05M000001 2.1e-40 168.3 86 93.0
V3.Lp_chr3_0G402 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-39 166.0 94 84.0
V3.Lp_chr3_0G11850 Lolium perenne HOM05M000028 ORTHO05M000016 1.8e-39 165.2 92 85.9
V3.Lp_chr5_0G15732 Lolium perenne HOM05M000006 ORTHO05M000001 2.0e-38 161.8 93 87.1
V3.Lp_chr6_0G20182 Lolium perenne HOM05M000006 ORTHO05M000001 1.7e-37 158.7 94 85.1
V3.Lp_chr3_0G760 Lolium perenne HOM05M000006 ORTHO05M000001 2.9e-37 157.9 95 81.1
V3.Lp_chr3_0G11664 Lolium perenne HOM05M000006 ORTHO05M000001 1.9e-36 155.2 79 94.9
V3.Lp_chr1_0G7442 Lolium perenne HOM05M000006 ORTHO05M000001 2.4e-36 154.8 99 76.8
V3.Lp_scaffold_6058G2 Lolium perenne HOM05M000006 ORTHO05M000001 3.5e-35 151.0 94 80.9
V3.Lp_chr1_0G7194 Lolium perenne HOM05M000006 ORTHO05M000001 5.1e-34 147.1 80 85.0
V3.Lp_scaffold_693G4 Lolium perenne HOM05M000006 ORTHO05M000001 8.7e-34 146.4 72 93.1
V3.Lp_chr2_0G10626 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-33 146.0 94 76.6
V3.Lp_chr3_0G11368 Lolium perenne HOM05M000006 ORTHO05M000001 8.4e-29 129.8 72 84.7
V3.Lp_chr1_0G7622 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-28 129.4 87 74.7
V3.Lp_chr2_0G10888 Lolium perenne HOM05M000006 ORTHO05M000001 2.4e-28 128.3 72 84.7
V3.Lp_chr5_0G8220 Lolium perenne HOM05M000006 ORTHO05M000001 9.3e-28 126.3 94 68.1
V3.Lp_chr4_0G15648 Lolium perenne HOM05M000006 ORTHO05M000001 3.5e-27 124.4 65 86.2
V3.Lp_chr1_0G8350 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-26 122.5 99 60.6
V3.Lp_chr1_0G16428 Lolium perenne HOM05M000006 ORTHO05M000001 2.1e-24 115.2 64 79.7
V3.Lp_scaffold_6039G2 Lolium perenne HOM05M000006 ORTHO05M000001 1.5e-22 109.0 94 60.6
V3.Lp_chr6_0G20010 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-17 92.8 47 87.2
V3.Lp_chr2_0G8420 Lolium perenne HOM05M000006 ORTHO05M000001 4.3e-17 90.9 49 89.8
V3.Lp_chr3_0G12132 Lolium perenne HOM05M000006 ORTHO05M000001 1.2e-14 82.8 94 47.9
V3.Lp_chr2_0G9348 Lolium perenne HOM05M000006 ORTHO05M000001 7.6e-14 80.1 56 66.1
V3.Lp_chr4_0G15644 Lolium perenne HOM05M000006 ORTHO05M000001 1.0e-13 79.7 70 52.9
V3.Lp_chr2_0G13826 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-13 79.3 64 56.2
V3.Lp_chr3_0G958 Lolium perenne HOM05M000006 ORTHO05M000001 2.2e-13 78.6 55 65.5
AET3Gv20551000 Aegilops tauschii HOM05M000006 ORTHO05M000001 6.5e-13 77.0 84 45.2
V3.Lp_chr3_0G1362 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-12 76.3 53 64.2
V3.Lp_chr6_0G8042 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-12 76.3 53 64.2
V3.Lp_scaffold_7633G6 Lolium perenne HOM05M000006 ORTHO05M000001 1.1e-12 76.3 53 64.2
V3.Lp_chr3_0G1288 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G1306 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G398 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G408 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G414 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G838 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr4_0G15576 Lolium perenne HOM05M000006 ORTHO05M000001 1.4e-12 75.9 53 64.2
V3.Lp_chr3_0G594 Lolium perenne HOM05M000006 ORTHO05M000001 1.9e-12 75.5 64 54.7
V3.Lp_scaffold_1734G2 Lolium perenne HOM05M000006 ORTHO05M000001 2.5e-12 75.1 59 69.5
V3.Lp_chr1_0G7542 Lolium perenne HOM05M000006 ORTHO05M000001 3.2e-12 74.7 53 62.3
V3.Lp_chr3_0G902 Lolium perenne HOM05M000006 ORTHO05M000001 4.2e-12 74.3 52 63.5
V3.Lp_chr2_0G9824 Lolium perenne HOM05M000006 ORTHO05M000001 1.6e-11 72.4 38 81.6
V3.Lp_chr4_0G16016 Lolium perenne HOM05M000006 ORTHO05M000001 1.6e-11 72.4 53 62.3
V3.Lp_chr5_0G6212 Lolium perenne HOM05M011649 ORTHO05M000001 2.1e-11 72.0 96 47.9
V3.Lp_chr3_0G730 Lolium perenne HOM05M011649 ORTHO05M000001 6.0e-11 70.5 96 46.9
V3.Lp_chr1_0G7576 Lolium perenne HOM05M011649 ORTHO05M000001 7.9e-11 70.1 96 46.9
V3.Lp_chr2_0G10034 Lolium perenne HOM05M011649 ORTHO05M000001 7.9e-11 70.1 96 46.9
V3.Lp_chr3_0G1178 Lolium perenne HOM05M000006 ORTHO05M000001 7.9e-11 70.1 96 46.9
V3.Lp_chr3_0G562 Lolium perenne HOM05M011649 ORTHO05M000001 7.9e-11 70.1 96 46.9
V3.Lp_chr2_0G8724 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-10 69.3 39 87.2
V3.Lp_chr2_0G12464 Lolium perenne HOM05M000006 ORTHO05M000001 2.3e-10 68.6 38 78.9
V3.Lp_chr3_0G1092 Lolium perenne HOM05M000006 ORTHO05M000001 2.3e-10 68.6 35 82.9
V3.Lp_chr1_0G7604 Lolium perenne HOM05M000006 ORTHO05M000001 3.0e-10 68.2 96 45.8
V3.Lp_chr3_0G18208 Lolium perenne HOM05M000006 ORTHO05M000001 3.0e-10 68.2 53 58.5
V3.Lp_chr4_0G16918 Lolium perenne HOM05M000006 ORTHO05M000001 3.0e-10 68.2 35 94.3
V3.Lp_chr6_0G3996 Lolium perenne HOM05M000006 ORTHO05M000001 3.0e-10 68.2 92 47.8
V3.Lp_chr4_0G15532 Lolium perenne HOM05M000006 ORTHO05M000001 3.9e-10 67.8 34 85.3
V3.Lp_chr1_0G12280 Lolium perenne HOM05M011649 ORTHO05M000001 5.1e-10 67.4 96 45.8
V3.Lp_chr4_0G13998 Lolium perenne HOM05M011649 ORTHO05M000001 5.1e-10 67.4 96 44.8
V3.Lp_chr3_0G560 Lolium perenne HOM05M011649 ORTHO05M000001 1.1e-09 66.2 96 44.8
V3.Lp_chr3_0G1426 Lolium perenne HOM05M011649 ORTHO05M000001 1.5e-09 65.9 96 45.8
V3.Lp_chr3_0G2966 Lolium perenne HOM05M000006 ORTHO05M000001 1.9e-09 65.5 37 81.1
V3.Lp_chr6_0G16308 Lolium perenne HOM05M000006 ORTHO05M000001 3.3e-09 64.7 44 63.6
V3.Lp_chr6_0G19904 Lolium perenne HOM05M000006 ORTHO05M000001 3.3e-09 64.7 44 63.6
V3.Lp_chr3_0G1032 Lolium perenne HOM05M000006 ORTHO05M000001 1.3e-08 62.8 101 41.6
V3.Lp_chr5_0G6432 Lolium perenne HOM05M011649 ORTHO05M000001 2.2e-08 62.0 96 44.8
GWHGAZTO050210 Oryza alta HOM05M000006 ORTHO05M000001 3.7e-08 61.2 64 56.2
GWHGAZTO038689 Oryza alta HOM05M000006 ORTHO05M000001 1.4e-07 59.3 90 44.4
V3.Lp_chr4_0G16058 Lolium perenne HOM05M000006 ORTHO05M000001 2.4e-07 58.5 33 87.9
V3.Lp_chr3_0G564 Lolium perenne HOM05M011649 ORTHO05M000001 4.1e-07 57.8 96 41.7
TRITD7Av1G111680 Triticum turgidum HOM05M003011 ORTHO05M003403 4.1e-07 57.8 41 53.7
V3.Lp_chr5_0G6632 Lolium perenne HOM05M000006 ORTHO05M000001 1.5e-06 55.8 46 60.9
GWHGAZTO074922 Oryza alta HOM05M000006 ORTHO05M000001 3.4e-06 54.7 64 50.0
GWHGAZTO037755 Oryza alta HOM05M000006 ORTHO05M000001 7.7e-06 53.5 65 49.2


User provided reference genes

Program Settings