Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_scaffold_12G6 Lolium perenne HOM05M007568 ORTHO05M001892 9.9e-231 802.4 413 100.0
V3.Lp_chr2_0G7300 Lolium perenne HOM05M007568 ORTHO05M001892 3.6e-108 395.2 248 81.9
AET4Gv20849100 Aegilops tauschii HOM05M007568 ORTHO05M001892 3.8e-41 172.6 230 40.9
TRIDC5AG076650 Triticum dicoccoides HOM05M007568 ORTHO05M001892 3.8e-41 172.6 247 40.5
V3.Lp_chr4_0G21398 Lolium perenne HOM05M007568 ORTHO05M001892 5.0e-41 172.2 233 42.5
Horvu_MOREX_4H01G532800 Hordeum vulgare HOM05M007568 ORTHO05M001892 6.5e-41 171.8 230 42.2
V3.Lp_chr2_0G7302 Lolium perenne HOM05M007568 ORTHO05M001892 6.5e-41 171.8 233 42.5
V3.Lp_chr3_0G9208 Lolium perenne HOM05M007568 ORTHO05M001892 6.5e-41 171.8 233 42.1
V3.Lp_chr3_0G6390 Lolium perenne HOM05M007568 ORTHO05M001892 8.5e-41 171.4 233 42.1
TRIDC4BG062040 Triticum dicoccoides HOM05M007568 ORTHO05M001892 1.1e-40 171.0 233 40.3
V3.Lp_chr3_0G7580 Lolium perenne HOM05M007568 ORTHO05M001892 2.1e-39 166.8 233 41.2
V3.Lp_chr2_0G13416 Lolium perenne HOM05M007568 ORTHO05M001892 8.0e-39 164.9 233 40.8
V3.Lp_chr2_0G14906 Lolium perenne HOM05M007568 ORTHO05M001892 8.0e-39 164.9 233 40.8
V3.Lp_chr3_0G19998 Lolium perenne HOM05M007568 ORTHO05M001892 8.0e-39 164.9 233 40.8
V3.Lp_scaffold_12G10 Lolium perenne HOM05M007568 ORTHO05M001892 8.0e-39 164.9 233 40.8
V3.Lp_chr3_0G20030 Lolium perenne HOM05M007568 ORTHO05M001892 1.4e-38 164.1 250 39.6
V3.Lp_chr1_0G1336 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr1_0G7294 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr1_0G9576 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr2_0G1728 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr2_0G19470 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr3_0G17944 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr6_0G8978 Lolium perenne HOM05M007568 ORTHO05M001892 1.8e-38 163.7 233 40.3
V3.Lp_chr4_0G8484 Lolium perenne HOM05M007568 ORTHO05M001892 6.8e-38 161.8 233 40.8
V3.Lp_chr6_0G12416 Lolium perenne HOM05M007568 ORTHO05M001892 2.0e-37 160.2 298 36.2
V3.Lp_chr2_0G9288 Lolium perenne HOM05M007568 ORTHO05M001892 4.8e-36 155.6 234 38.0
V3.Lp_scaffold_8094G2 Lolium perenne HOM05M007568 ORTHO05M001892 4.8e-36 155.6 234 38.0
V3.Lp_chr1_0G17856 Lolium perenne HOM05M007568 ORTHO05M001892 7.0e-35 151.8 344 34.3
V3.Lp_chr6_0G4480 Lolium perenne HOM05M007568 ORTHO05M001892 7.0e-35 151.8 287 35.5
V3.Lp_chr4_0G10252 Lolium perenne HOM05M007568 ORTHO05M001892 9.1e-35 151.4 343 31.5
V3.Lp_chr4_0G11534 Lolium perenne HOM05M007568 ORTHO05M001892 1.2e-34 151.0 234 37.2
V3.Lp_chr4_0G13056 Lolium perenne HOM05M007568 ORTHO05M001892 1.2e-34 151.0 316 34.2
V3.Lp_chr2_0G4658 Lolium perenne HOM05M007568 ORTHO05M001892 3.5e-34 149.4 346 31.5
V3.Lp_chr6_0G8624 Lolium perenne HOM05M007568 ORTHO05M001892 3.5e-34 149.4 351 33.3
V3.Lp_scaffold_1015G12 Lolium perenne HOM05M007568 ORTHO05M001892 3.5e-34 149.4 250 37.2
V3.Lp_chr1_0G17864 Lolium perenne HOM05M007568 ORTHO05M001892 4.5e-34 149.1 352 33.5
V3.Lp_chr4_0G4106 Lolium perenne HOM05M007568 ORTHO05M001892 4.5e-34 149.1 319 32.9
V3.Lp_chr3_0G8530 Lolium perenne HOM05M007568 ORTHO05M001892 1.3e-33 147.5 279 33.3
V3.Lp_chr1_0G16990 Lolium perenne HOM05M007568 ORTHO05M001892 1.7e-33 147.1 339 31.0
V3.Lp_chr4_0G1082 Lolium perenne HOM05M007568 ORTHO05M001892 2.2e-33 146.7 344 31.4
V3.Lp_chr5_0G10452 Lolium perenne HOM05M007568 ORTHO05M001892 1.1e-32 144.4 344 31.1
V3.Lp_chr3_0G25268 Lolium perenne HOM05M007568 ORTHO05M001892 1.9e-32 143.7 343 31.2
V3.Lp_chr4_0G9300 Lolium perenne HOM05M007568 ORTHO05M001892 1.9e-32 143.7 343 31.2
V3.Lp_chr5_0G14826 Lolium perenne HOM05M007568 ORTHO05M001892 1.9e-32 143.7 343 31.2
V3.Lp_chr6_0G15392 Lolium perenne HOM05M007568 ORTHO05M001892 1.9e-32 143.7 343 31.2
V3.Lp_chr6_0G18472 Lolium perenne HOM05M007568 ORTHO05M001892 1.9e-32 143.7 343 31.2
V3.Lp_chr4_0G320 Lolium perenne HOM05M007568 ORTHO05M001892 4.2e-32 142.5 238 35.7
V3.Lp_chr4_0G8178 Lolium perenne HOM05M007568 ORTHO05M001892 7.2e-32 141.7 221 37.6
V3.Lp_chr3_0G3952 Lolium perenne HOM05M007568 ORTHO05M001892 5.9e-26 122.1 315 29.8
V3.Lp_scaffold_12G8 Lolium perenne HOM05M007568 ORTHO05M001892 6.1e-23 112.1 170 40.0
V3.Lp_chr5_0G15132 Lolium perenne HOM05M007568 ORTHO05M001892 1.4e-22 110.9 343 28.9
TRITD1Bv1G056890 Triticum turgidum HOM05M007568 ORTHO05M001892 2.3e-22 110.2 200 35.0
TraesCS6B03G0096400 Triticum aestivum HOM05M007568 ORTHO05M001892 8.9e-22 108.2 212 34.0
TraesCS5A03G0096400 Triticum aestivum HOM05M007568 ORTHO05M001892 1.5e-21 107.5 195 35.4
AET1Gv20923100 Aegilops tauschii HOM05M005735 ORTHO05M001892 5.6e-16 89.0 225 25.3
EJB05_32863 Eragrostis curvula HOM05M008430 ORTHO05M001892 1.8e-14 84.0 208 22.1
EJB05_33635 Eragrostis curvula HOM05M008430 ORTHO05M001892 4.0e-14 82.8 208 21.6
EJB05_44634 Eragrostis curvula HOM05M008430 ORTHO05M001892 4.0e-14 82.8 208 21.6
GWHGAZTO007499 Oryza alta HOM05M005735 ORTHO05M001892 6.8e-14 82.0 244 25.0
GWHGAZTO018189 Oryza alta HOM05M005735 ORTHO05M001892 8.9e-14 81.6 244 25.0
GWHGAZTO041707 Oryza alta HOM05M005735 ORTHO05M001892 8.9e-14 81.6 244 25.0
GWHGAZTO075180 Oryza alta HOM05M005735 ORTHO05M001892 8.9e-14 81.6 244 25.0
GWHGAZTO061138 Oryza alta HOM05M005735 ORTHO05M001892 1.2e-13 81.3 244 25.0
GWHGAZTO061141 Oryza alta HOM05M005735 ORTHO05M001892 1.2e-13 81.3 244 25.0
GWHGAZTO059584 Oryza alta HOM05M005735 ORTHO05M001892 1.5e-13 80.9 244 25.0
GWHGAZTO065992 Oryza alta HOM05M005735 ORTHO05M001892 1.5e-13 80.9 318 23.3
Sspon.07G0008140-3D Saccharum spontaneum HOM05M005735 ORTHO05M001892 1.5e-13 80.9 309 25.6
Sspon.07G0008140-1A Saccharum spontaneum HOM05M005735 ORTHO05M001892 2.6e-13 80.1 311 25.7
GWHGAZTO025812 Oryza alta HOM05M005735 ORTHO05M001892 4.4e-13 79.3 244 24.6
GWHGAZTO089780 Oryza alta HOM05M005735 ORTHO05M001892 5.8e-13 79.0 244 24.6
Sobic.009G135300 Sorghum bicolor HOM05M005735 ORTHO05M001892 9.8e-13 78.2 262 26.7
TRITD3Bv1G041090 Triticum turgidum HOM05M007568 ORTHO05M262471 9.8e-13 78.2 214 27.1
Misin04G053900 Miscanthus sinensis HOM05M008430 ORTHO05M001892 6.4e-12 75.5 232 23.7
Zjn_sc00064.1.g00520.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M008430 ORTHO05M001892 1.1e-11 74.7 286 22.7
TRITD3Bv1G161840 Triticum turgidum HOM05M014865 ORTHO05M014545 7.0e-11 72.0 188 26.6
EJB05_35161 Eragrostis curvula HOM05M013025 ORTHO05M015489 1.6e-10 70.9 220 23.2
GWHGAZTO065898 Oryza alta HOM05M005735 ORTHO05M001892 1.0e-09 68.2 179 24.6
GWHGAZTO071546 Oryza alta HOM05M005735 ORTHO05M001892 1.0e-09 68.2 179 24.6
GWHGASIY001657 Secale cereale HOM05M007568 ORTHO05M014545 2.3e-09 67.0 94 39.4
Zjn_sc00652.1.g00010.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M008430 ORTHO05M001892 3.9e-09 66.2 171 25.1
GWHGAZTO031535 Oryza alta HOM05M005735 ORTHO05M001892 1.1e-08 64.7 168 25.0
OsKitaake05g097200 Oryza sativa Kitaake HOM05M009348 ORTHO05M001892 4.3e-08 62.8 200 27.0
GWHGASIY014863 Secale cereale HOM05M007568 ORTHO05M001892 1.6e-07 60.8 94 38.3
EJB05_51755 Eragrostis curvula HOM05M009189 ORTHO05M011174 2.1e-07 60.5 234 22.2
GWHGAZTO072544 Oryza alta HOM05M010532 ORTHO05M001892 3.1e-06 56.6 231 20.3


User provided reference genes

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