Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_scaffold_11G8 Lolium perenne HOM05M009837 ORTHO05M001009 1.0e-182 642.9 422 100.0
V3.Lp_scaffold_8630G2 Lolium perenne HOM05M009837 ORTHO05M001009 1.9e-152 542.3 386 94.0
V3.Lp_chr4_0G29418 Lolium perenne HOM05M009837 ORTHO05M001009 6.5e-145 517.3 428 88.1
V3.Lp_chr5_0G3380 Lolium perenne HOM05M009837 ORTHO05M001009 1.4e-139 499.6 393 81.9
V3.Lp_scaffold_11G12 Lolium perenne HOM05M009837 ORTHO05M001009 6.5e-137 490.7 386 92.2
V3.Lp_scaffold_6125G2 Lolium perenne HOM05M009837 ORTHO05M001009 1.3e-124 449.9 319 87.1
V3.Lp_chr4_0G29410 Lolium perenne HOM05M009837 ORTHO05M001009 3.5e-106 388.7 282 88.3
V3.Lp_chr4_0G27858 Lolium perenne HOM05M009837 ORTHO05M001009 4.0e-102 375.2 223 96.9
V3.Lp_chr4_0G28478 Lolium perenne HOM05M009837 ORTHO05M001009 2.6e-69 266.2 429 52.2
PH02Gene10506 Phyllostachys edulis HOM05M000141 ORTHO05M001009 6.5e-36 155.2 184 51.6
PH02Gene20724 Phyllostachys edulis HOM05M001241 ORTHO05M001009 3.2e-35 152.9 186 45.7
PH02Gene18832 Phyllostachys edulis HOM05M001241 ORTHO05M001009 5.1e-33 145.6 187 44.4
GWHGASIY035375 Secale cereale HOM05M009837 ORTHO05M001009 1.1e-32 144.4 164 47.0
AET6Gv20957700 Aegilops tauschii HOM05M009837 ORTHO05M001009 5.7e-32 142.1 157 47.1
TraesCS6B03G1211800 Triticum aestivum HOM05M009837 ORTHO05M001009 5.7e-32 142.1 157 47.1
Horvu_MOREX_6H01G580000 Hordeum vulgare HOM05M009837 ORTHO05M001009 1.6e-31 140.6 155 48.4
TraesCS6A03G0988200 Triticum aestivum HOM05M009837 ORTHO05M001009 1.8e-30 137.1 158 46.8
AET5Gv20256500 Aegilops tauschii HOM05M001241 ORTHO05M001009 3.8e-28 129.4 198 40.4
TraesCS5D03G0260400 Triticum aestivum HOM05M001241 ORTHO05M001009 3.8e-28 129.4 198 40.4
TraesCS5B03G0264400 Triticum aestivum HOM05M001241 ORTHO05M001009 1.1e-27 127.9 165 44.2
TraesCS5A03G0248700 Triticum aestivum HOM05M001241 ORTHO05M001009 2.5e-27 126.7 208 39.4
TRITD5Av1G055540 Triticum turgidum HOM05M001241 ORTHO05M001009 2.5e-27 126.7 208 39.4
TRITD5Bv1G050250 Triticum turgidum HOM05M001241 ORTHO05M001009 5.5e-27 125.6 165 43.6
TraesCS3A03G0246600 Triticum aestivum HOM05M001241 ORTHO05M001009 4.6e-26 122.5 146 45.2
GWHGASIY024993 Secale cereale HOM05M001241 ORTHO05M001009 1.4e-25 120.9 169 42.0
TraesCS6B03G0920700 Triticum aestivum HOM05M001241 ORTHO05M001009 2.3e-25 120.2 183 39.9
TraesCS6B03G0920500 Triticum aestivum HOM05M001241 ORTHO05M001009 1.5e-24 117.5 220 35.9
Pahal.8G047600 Panicum hallii HOM05M001241 ORTHO05M001009 2.8e-23 113.2 198 39.4
Horvu_MOREX_6H01G452400 Hordeum vulgare HOM05M001241 ORTHO05M001009 6.3e-23 112.1 178 40.4
AET6Gv20735200 Aegilops tauschii HOM05M001241 ORTHO05M001009 1.4e-22 110.9 178 38.2
Misin09G053900 Miscanthus sinensis HOM05M001241 ORTHO05M001009 1.7e-20 104.0 212 36.3
Sevir.8G055200 Setaria viridis HOM05M001241 ORTHO05M001009 2.2e-20 103.6 202 36.6
PH02Gene23507 Phyllostachys edulis HOM05M009837 ORTHO05M001009 3.8e-20 102.8 94 54.3
Dexi8B01G0004310 Digitaria exilis HOM05M001241 ORTHO05M001009 6.5e-20 102.1 203 37.4
V3.Lp_chr4_0G22374 Lolium perenne HOM05M001241 ORTHO05M001009 2.5e-19 100.1 196 36.2
V3.Lp_chr1_0G14324 Lolium perenne HOM05M001241 ORTHO05M001009 7.2e-19 98.6 186 37.1
GWHGAORA011139 Cenchrus purpureus HOM05M001241 ORTHO05M001009 1.6e-18 97.4 199 34.7
GWHGAZTO062861 Oryza alta HOM05M001241 ORTHO05M001009 4.7e-18 95.9 153 41.8
EJB05_06168 Eragrostis curvula HOM05M001241 ORTHO05M001009 6.1e-18 95.5 155 39.4
Pahal.8G047700 Panicum hallii HOM05M001241 ORTHO05M001009 1.0e-17 94.7 192 34.4
Bradi4g24060 Brachypodium distachyon HOM05M001241 ORTHO05M001009 1.4e-17 94.4 210 31.4
GWHGAORA011140 Cenchrus purpureus HOM05M001241 ORTHO05M001009 1.4e-17 94.4 194 36.1
Sspon.05G0029330-1B Saccharum spontaneum HOM05M001241 ORTHO05M001009 1.8e-17 94.0 234 34.6
GWHGAZTO010711 Oryza alta HOM05M001241 ORTHO05M001009 7.4e-16 88.6 158 38.0
GWHGAORA042727 Cenchrus purpureus HOM05M001241 ORTHO05M001009 9.7e-16 88.2 164 36.6
Sobic.005G060000 Sorghum bicolor HOM05M001241 ORTHO05M001009 1.7e-15 87.4 237 31.2
GWHGAORA011185 Cenchrus purpureus HOM05M001241 ORTHO05M001009 1.1e-14 84.7 195 32.3
Bradi4g24100 Brachypodium distachyon HOM05M001241 ORTHO05M001009 1.8e-14 84.0 155 33.5
Bradi1g36200 Brachypodium distachyon HOM05M001241 ORTHO05M001009 4.1e-14 82.8 150 34.7
OsKitaake11g054000 Oryza sativa Kitaake HOM05M001241 ORTHO05M001009 7.7e-13 78.6 148 35.8
OB11G13990 Oryza brachyantha HOM05M001241 ORTHO05M001009 2.2e-12 77.0 151 36.4
Sobic.005G059900 Sorghum bicolor HOM05M001241 ORTHO05M001009 1.9e-11 73.9 172 34.3
Misin10G046000 Miscanthus sinensis HOM05M001241 ORTHO05M001009 9.4e-11 71.6 235 28.9
Dexi8A01G0005150 Digitaria exilis HOM05M009837 ORTHO05M001009 4.7e-10 69.3 84 45.2
OsR498G0713975100.01 Oryza sativa ssp. indica HOM05M001241 ORTHO05M001009 2.0e-08 63.9 132 32.6
GWHGAZTO090632 Oryza alta HOM05M001241 ORTHO05M001009 2.6e-08 63.5 175 29.7
GWHGAZTO090633 Oryza alta HOM05M001241 ORTHO05M001009 2.6e-08 63.5 175 29.7
Dexi8A01G0005160 Digitaria exilis HOM05M001241 ORTHO05M001009 3.3e-08 63.2 153 44.4
OB07G17130 Oryza brachyantha HOM05M001241 ORTHO05M001009 4.4e-08 62.8 132 31.8
OsKitaake07g063300 Oryza sativa Kitaake HOM05M001241 ORTHO05M001009 4.4e-08 62.8 198 32.3
Misin10G045900 Miscanthus sinensis HOM05M009837 ORTHO05M001009 5.7e-08 62.4 163 32.5
GWHGAZTO090636 Oryza alta HOM05M001241 ORTHO05M001009 5.7e-08 62.4 173 29.5
GWHGAZTO090642 Oryza alta HOM05M001241 ORTHO05M001009 5.7e-08 62.4 173 29.5
Os07g0272700 Oryza sativa ssp. japonica HOM05M001241 ORTHO05M001009 9.7e-08 61.6 132 31.8
EJB05_06183 Eragrostis curvula HOM05M009837 ORTHO05M001009 1.7e-07 60.8 107 36.4
GWHGAZTO042436 Oryza alta HOM05M001241 ORTHO05M001009 2.2e-07 60.5 131 33.6
GWHGAZTO090090 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090091 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090092 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090100 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090107 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090108 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090112 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090117 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
GWHGAZTO090131 Oryza alta HOM05M001241 ORTHO05M001009 2.8e-07 60.1 132 32.6
OsKitaake07g063000 Oryza sativa Kitaake HOM05M001241 ORTHO05M001009 2.8e-07 60.1 195 30.3
GWHGAZTO042424 Oryza alta HOM05M001241 ORTHO05M001009 4.8e-07 59.3 131 33.6
GWHGAZTO090121 Oryza alta HOM05M001241 ORTHO05M001009 4.8e-07 59.3 132 32.6
GWHGAZTO090126 Oryza alta HOM05M001241 ORTHO05M001009 4.8e-07 59.3 132 32.6
GWHGAORA031452 Cenchrus purpureus HOM05M001241 ORTHO05M001009 6.3e-07 58.9 179 26.3
Dexi8B01G0004320 Digitaria exilis HOM05M001241 ORTHO05M001009 6.3e-07 58.9 79 40.5
GWHGAZTO034123 Oryza alta HOM05M001241 ORTHO05M001009 8.2e-07 58.5 132 31.8
GWHGAZTO042953 Oryza alta HOM05M001241 ORTHO05M001009 8.2e-07 58.5 174 28.2
GWHGAZTO042974 Oryza alta HOM05M001241 ORTHO05M001009 8.2e-07 58.5 174 28.2
OB07G14680 Oryza brachyantha HOM05M001241 ORTHO05M001009 1.4e-06 57.8 133 30.8
GWHGAZTO042959 Oryza alta HOM05M001241 ORTHO05M001009 1.8e-06 57.4 131 31.3
GWHGAZTO042972 Oryza alta HOM05M001241 ORTHO05M001009 1.8e-06 57.4 131 31.3
Ot_Chr1_g09268 Oropetium thomaeum HOM05M001241 ORTHO05M001009 2.4e-06 57.0 145 29.7
Bradi4g24051 Brachypodium distachyon HOM05M009837 ORTHO05M001009 3.1e-06 56.6 100 33.0
EJB05_53146 Eragrostis curvula HOM05M009837 ORTHO05M001009 3.1e-06 56.6 91 38.5
Ot_Chr1_g09267 Oropetium thomaeum HOM05M001241 ORTHO05M001009 3.1e-06 56.6 122 32.0
OB07G14710 Oryza brachyantha HOM05M001241 ORTHO05M001009 4.1e-06 56.2 145 31.7
GWHGAORA044965 Cenchrus purpureus HOM05M001241 ORTHO05M001009 7.0e-06 55.5 185 27.6
GWHGAZTO025799 Oryza alta HOM05M001241 ORTHO05M001009 7.0e-06 55.5 132 31.8
GWHGAZTO042956 Oryza alta HOM05M001241 ORTHO05M001009 7.0e-06 55.5 195 27.7
GWHGAZTO042957 Oryza alta HOM05M001241 ORTHO05M001009 7.0e-06 55.5 195 27.7
GWHGAZTO042962 Oryza alta HOM05M001241 ORTHO05M001009 7.0e-06 55.5 195 27.7


User provided reference genes

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