Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr7_0.1G9076 Lolium perenne HOM05M007869 ORTHO05M009824 1.1e-54 215.7 111 100.0
OsR498G0407483000.01 Oryza sativa ssp. indica HOM05M007869 ORTHO05M009824 5.5e-19 97.1 88 65.9
Bradi5g01763 Brachypodium distachyon HOM05M007869 ORTHO05M009824 2.1e-18 95.1 52 92.3
Zm00007a00050024 Zea mays B104 HOM05M007869 ORTHO05M009824 3.6e-18 94.4 92 58.7
Zm00007a00017323 Zea mays B104 HOM05M007869 ORTHO05M009824 2.3e-17 91.7 93 62.4
AET2Gv20014700 Aegilops tauschii HOM05M007869 ORTHO05M009824 3.9e-17 90.9 82 67.1
TRIDC2AG000700 Triticum dicoccoides HOM05M007869 ORTHO05M009824 3.9e-17 90.9 61 82.0
EJB05_56747 Eragrostis curvula HOM05M007869 ORTHO05M009824 5.1e-17 90.5 71 73.2
Misin11G129400 Miscanthus sinensis HOM05M007869 ORTHO05M009824 1.5e-16 89.0 52 84.6
Seita.7G013700 Setaria italica HOM05M007869 ORTHO05M009824 1.5e-16 89.0 52 84.6
Sevir.7G042100 Setaria viridis HOM05M007869 ORTHO05M009824 1.5e-16 89.0 52 84.6
OB04G10700 Oryza brachyantha HOM05M007869 ORTHO05M009824 2.0e-16 88.6 53 86.8
TraesCS2D03G0015200 Triticum aestivum HOM05M007869 ORTHO05M009824 2.6e-16 88.2 52 90.4
TraesCS2A03G0016000 Triticum aestivum HOM05M007869 ORTHO05M009824 4.4e-16 87.4 52 86.5
OsKitaake04g007600 Oryza sativa Kitaake HOM05M007869 ORTHO05M009824 7.4e-16 86.7 53 84.9
Os04g0117100 Oryza sativa ssp. japonica HOM05M007869 ORTHO05M009824 7.4e-16 86.7 53 84.9
Misin12G136900 Miscanthus sinensis HOM05M007869 ORTHO05M009824 1.3e-15 85.9 50 84.0
GWHGASIY041999 Secale cereale HOM05M007869 ORTHO05M009824 2.2e-15 85.1 52 84.6
Pahal.7G016700 Panicum hallii HOM05M007869 ORTHO05M009824 2.8e-15 84.7 52 80.8
Zm00001eb425810 Zea mays B73 HOM05M007869 ORTHO05M009824 2.8e-15 84.7 52 80.8
TraesCS2B03G0025600 Triticum aestivum HOM05M007869 ORTHO05M009824 3.7e-15 84.3 52 80.8
Zm00001eb078460 Zea mays B73 HOM05M007869 ORTHO05M009824 6.3e-15 83.6 52 78.8
TRIDC2BG000700 Triticum dicoccoides HOM05M007869 ORTHO05M009824 9.1e-14 79.7 78 56.4
Ot_Chr6_g23855 Oropetium thomaeum HOM05M007869 ORTHO05M009824 3.4e-13 77.8 54 74.1
Dexi7B01G0001080 Digitaria exilis HOM05M007869 ORTHO05M009824 2.1e-10 68.6 40 82.5
EJB05_58101 Eragrostis curvula HOM05M007869 ORTHO05M009824 3.6e-10 67.8 88 50.0
Sspon.05G0032260-1C Saccharum spontaneum HOM05M007869 ORTHO05M009824 8.8e-09 63.2 40 77.5
Ma02_g14100 Musa acuminata HOM05M007869 ORTHO05M009824 1.5e-08 62.4 51 68.6
Potri.004G164066 Populus trichocarpa HOM05M007869 ORTHO05M009824 2.0e-08 62.0 50 70.0
Potri.002G024900 Populus trichocarpa HOM05M007869 ORTHO05M009824 4.4e-08 60.8 50 68.0
Aco007529 Ananas comosus HOM05M007869 ORTHO05M009824 5.7e-08 60.5 51 66.7
Ma08_g15230 Musa acuminata HOM05M007869 ORTHO05M009824 5.7e-08 60.5 75 52.0
Potri.005G236500 Populus trichocarpa HOM05M007869 ORTHO05M009824 7.4e-08 60.1 54 64.8
Solyc01g110540.3 Solanum lycopersicum HOM05M007869 ORTHO05M009824 9.7e-08 59.7 51 68.6
Potri.009G125832 Populus trichocarpa HOM05M007869 ORTHO05M009824 2.2e-07 58.5 52 63.5
Ma11_g00650 Musa acuminata HOM05M007869 ORTHO05M009824 2.8e-07 58.2 51 60.8
Glyma.12G036000 Glycine max HOM05M007869 ORTHO05M009824 3.7e-07 57.8 50 66.0
Pp3c2_20190 Physcomitrium patens HOM05M007869 ORTHO05M009824 6.3e-07 57.0 47 70.2
AT5G15320 Arabidopsis thaliana HOM05M007869 ORTHO05M009824 1.4e-06 55.8 54 57.4
DDU689G0262 Dioscorea dumetorum HOM05M007869 ORTHO05M009824 3.1e-06 54.7 35 74.3
DDU776G0029 Dioscorea dumetorum HOM05M007869 ORTHO05M009824 3.1e-06 54.7 35 74.3
Pp3c1_20190 Physcomitrium patens HOM05M007869 ORTHO05M009824 4.1e-06 54.3 37 70.3
SMO358G0321 Selaginella moellendorffii HOM05M007869 ORTHO05M009824 4.1e-06 54.3 44 61.4

Aegilops tauschii (1 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (2 genes)
Glycine max (1 genes)
Hordeum vulgare (0 genes)
Lolium perenne (1 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza alta (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (2 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (1 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings