Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g150103.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 4.3e-144 513.8 252 100.0
Solyc01g058593.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 8.5e-92 340.1 175 94.3
Solyc04g015635.2 Solanum lycopersicum HOM05M011456 ORTHO05M251947 5.8e-40 167.9 112 73.2
Solyc11g150144.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 2.3e-28 129.4 71 83.1
Solyc11g150101.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 6.6e-28 127.9 57 96.5
Solyc05g045957.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 4.3e-27 125.2 57 96.5
Solyc11g150123.1 Solanum lycopersicum HOM05M011456 ORTHO05M247753 5.6e-27 124.8 72 79.2
Solyc12g021265.1 Solanum lycopersicum HOM05M011456 ORTHO05M015516 5.6e-27 124.8 54 98.1
Sspon.04G0010410-3C Saccharum spontaneum HOM05M009834 ORTHO05M012276 1.4e-09 67.0 97 42.3
Ot_Chr3_gn33924 Oropetium thomaeum HOM05M009834 ORTHO05M012276 1.8e-09 66.6 47 72.3
Solyc10g150142.1 Solanum lycopersicum HOM05M011456 ORTHO05M022146 2.4e-09 66.2 94 44.7
Os02g0189700 Oryza sativa ssp. japonica HOM05M009834 ORTHO05M012276 6.9e-09 64.7 55 61.8
Ot_Chr1_gn31319 Oropetium thomaeum HOM05M009834 ORTHO05M012276 9.0e-09 64.3 47 70.2
Misin07G071000 Miscanthus sinensis HOM05M009834 ORTHO05M012276 4.4e-08 62.0 49 65.3
Solyc03g058420.3 Solanum lycopersicum HOM05M011456 ORTHO05M015516 4.4e-08 62.0 31 80.6
Solyc12g150122.1 Solanum lycopersicum HOM05M011456 ORTHO05M022146 4.4e-08 62.0 125 36.0
Solyc03g058343.1 Solanum lycopersicum HOM05M000126 ORTHO05M022146 5.8e-08 61.6 125 35.2
Ot_Chr1_gn31508 Oropetium thomaeum HOM05M009834 ORTHO05M012276 7.6e-08 61.2 47 63.8
Zm00007a00019075 Zea mays B104 HOM05M009834 ORTHO05M012276 1.7e-07 60.1 47 66.0
Ot_Chr1_gn31128 Oropetium thomaeum HOM05M009834 ORTHO05M012276 6.4e-07 58.2 48 62.5
Pahal.3G193766 Panicum hallii HOM05M009834 ORTHO05M012276 8.4e-07 57.8 43 67.4
Zm00007a00031937 Zea mays B104 HOM05M000853 ORTHO05M000688 1.4e-06 57.0 64 53.1
V3.Lp_chr5_0G5906 Lolium perenne HOM05M000126 ORTHO05M000055 2.4e-06 56.2 82 41.5
GWHGAZTO018786 Oryza alta HOM05M000126 ORTHO05M000055 5.4e-06 55.1 108 37.0


User provided reference genes

Program Settings