Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072000.2 Solanum lycopersicum HOM05M000010 ORTHO05M015500 2.6e-71 271.2 135 100.0
Solyc08g007630.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 1.4e-45 185.7 114 84.2
Solyc11g071420.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 5.3e-40 167.2 114 73.7
Solyc11g064770.3 Solanum lycopersicum HOM05M000010 ORTHO05M013808 2.0e-39 165.2 116 69.8
Solyc11g068360.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 1.3e-35 152.5 109 71.6
Solyc11g069620.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 2.5e-34 148.3 109 69.7
Solyc11g071430.1 Solanum lycopersicum HOM05M000010 ORTHO05M000491 3.2e-29 131.3 83 80.7
Solyc03g078300.3 Solanum lycopersicum HOM05M000010 ORTHO05M000491 3.0e-19 98.2 101 50.5
Solyc11g069930.3 Solanum lycopersicum HOM05M000010 ORTHO05M015500 9.6e-18 93.2 70 67.1
Solyc11g045410.1 Solanum lycopersicum HOM05M000010 ORTHO05M015500 2.4e-16 88.6 65 67.7
Potri.005G007001 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.7e-14 82.4 104 44.2
Potri.003G200200 Populus trichocarpa HOM05M000010 ORTHO05M000491 2.2e-14 82.0 102 45.1
Potri.003G200800 Populus trichocarpa HOM05M000010 ORTHO05M000491 3.8e-14 81.3 99 44.4
Solyc11g065780.3 Solanum lycopersicum HOM05M000010 ORTHO05M015500 3.8e-14 81.3 56 71.4
Potri.001G029300 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.4e-13 79.3 99 43.4
Potri.001G379700 Populus trichocarpa HOM05M000010 ORTHO05M000491 7.9e-12 73.6 111 39.6
Glyma.20G046100 Glycine max HOM05M000010 ORTHO05M000491 1.8e-11 72.4 97 41.2
Glyma.20G046200 Glycine max HOM05M000010 ORTHO05M000491 2.3e-11 72.0 97 41.2
Potri.017G014900 Populus trichocarpa HOM05M000010 ORTHO05M000491 3.0e-11 71.6 93 43.0
Glyma.13G194500 Glycine max HOM05M000010 ORTHO05M000491 6.7e-11 70.5 97 41.2
Glyma.U031205 Glycine max HOM05M000010 ORTHO05M000491 8.7e-11 70.1 93 44.1
Potri.017G015200 Populus trichocarpa HOM05M000010 ORTHO05M000491 8.7e-11 70.1 93 41.9
Potri.017G015300 Populus trichocarpa HOM05M000010 ORTHO05M000491 8.7e-11 70.1 93 43.0
Solyc11g069670.2 Solanum lycopersicum HOM05M000010 ORTHO05M015500 1.1e-10 69.7 57 61.4
Glyma.U031103 Glycine max HOM05M000010 ORTHO05M000491 1.9e-10 68.9 95 46.3
Glyma.03G037300 Glycine max HOM05M000010 ORTHO05M000491 4.3e-10 67.8 95 45.3
Glyma.03G038800 Glycine max HOM05M000010 ORTHO05M000491 4.3e-10 67.8 95 45.3
Glyma.16G079400 Glycine max HOM05M000010 ORTHO05M000491 4.3e-10 67.8 99 40.4
Potri.003G055600 Populus trichocarpa HOM05M000010 ORTHO05M000491 5.7e-10 67.4 109 38.5
Glyma.03G034900 Glycine max HOM05M000010 ORTHO05M000491 7.4e-10 67.0 95 45.3
Glyma.03G037100 Glycine max HOM05M000010 ORTHO05M000491 9.7e-10 66.6 95 45.3
Glyma.15G233400 Glycine max HOM05M000010 ORTHO05M000491 9.7e-10 66.6 99 40.4
Glyma.15G230700 Glycine max HOM05M000010 ORTHO05M000491 1.3e-09 66.2 99 39.4
Glyma.13G071900 Glycine max HOM05M000010 ORTHO05M000491 2.2e-09 65.5 102 36.3
Glyma.13G184800 Glycine max HOM05M000010 ORTHO05M000491 2.8e-09 65.1 102 35.3
Potri.T126806 Populus trichocarpa HOM05M000010 ORTHO05M000491 3.7e-09 64.7 99 37.4
Glyma.03G034500 Glycine max HOM05M000010 ORTHO05M000491 4.8e-09 64.3 95 43.2
Glyma.03G037000 Glycine max HOM05M000010 ORTHO05M000491 4.8e-09 64.3 95 44.2
Glyma.03G039300 Glycine max HOM05M000010 ORTHO05M000491 4.8e-09 64.3 83 45.8
Glyma.03G039218 Glycine max HOM05M000010 ORTHO05M000491 6.3e-09 63.9 95 43.2
Glyma.13G187900 Glycine max HOM05M000010 ORTHO05M000491 8.2e-09 63.5 102 33.3
Glyma.15G225200 Glycine max HOM05M000010 ORTHO05M000491 1.1e-08 63.2 107 36.4
Glyma.15G232800 Glycine max HOM05M000010 ORTHO05M000491 1.1e-08 63.2 99 39.4
GWHGAORA038388 Cenchrus purpureus HOM05M000010 ORTHO05M002781 1.4e-08 62.8 139 32.4
Glyma.03G034800 Glycine max HOM05M000010 ORTHO05M000491 1.4e-08 62.8 95 43.2
Glyma.06G254300 Glycine max HOM05M000010 ORTHO05M000491 1.8e-08 62.4 97 37.1
Solyc03g006740.3 Solanum lycopersicum HOM05M000010 ORTHO05M015500 2.4e-08 62.0 100 41.0
p5.00_sc35264_p0001 Elaeis guineensis HOM05M000010 ORTHO05M000320 4.1e-08 61.2 90 38.9
Glyma.13G193100 Glycine max HOM05M000010 ORTHO05M000491 4.1e-08 61.2 100 37.0
CALSI_Maker00046327 Calamus simplicifolius HOM05M000010 ORTHO05M011233 6.9e-08 60.5 118 35.6
CALSI_Maker00046340 Calamus simplicifolius HOM05M001071 ORTHO05M011233 6.9e-08 60.5 118 35.6
p5.00_sc00032_p0110 Elaeis guineensis HOM05M000010 ORTHO05M000491 6.9e-08 60.5 112 31.2
Glyma.15G226100 Glycine max HOM05M000010 ORTHO05M000491 6.9e-08 60.5 99 37.4
Glyma.U032005 Glycine max HOM05M000010 ORTHO05M000491 6.9e-08 60.5 93 37.6
Glyma.U032405 Glycine max HOM05M000010 ORTHO05M000491 6.9e-08 60.5 93 37.6
CALSI_Maker00046278 Calamus simplicifolius HOM05M000010 ORTHO05M011233 9.0e-08 60.1 112 38.4
CALSI_Maker00006471 Calamus simplicifolius HOM05M000010 ORTHO05M011233 1.2e-07 59.7 114 36.8
CALSI_Maker00023314 Calamus simplicifolius HOM05M000010 ORTHO05M000320 1.2e-07 59.7 88 30.7
CALSI_Maker00046289 Calamus simplicifolius HOM05M000010 ORTHO05M011233 1.5e-07 59.3 112 38.4
Glyma.15G230900 Glycine max HOM05M000010 ORTHO05M000491 1.5e-07 59.3 100 38.0
Potri.003G201800 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.5e-07 59.3 100 32.0
Glyma.06G318566 Glycine max HOM05M000010 ORTHO05M000491 2.0e-07 58.9 104 34.6
Glyma.13G190300 Glycine max HOM05M000010 ORTHO05M000491 2.0e-07 58.9 95 38.9
Potri.007G137101 Populus trichocarpa HOM05M000010 ORTHO05M000491 2.0e-07 58.9 113 33.6
p5.00_sc00225_p0001 Elaeis guineensis HOM05M000010 ORTHO05M000491 2.6e-07 58.5 117 31.6
Glyma.03G043650 Glycine max HOM05M000010 ORTHO05M000491 2.6e-07 58.5 96 38.5
Glyma.20G050700 Glycine max HOM05M000010 ORTHO05M000491 2.6e-07 58.5 97 35.1
Solyc11g042750.1 Solanum lycopersicum HOM05M000010 ORTHO05M015500 2.6e-07 58.5 31 90.3
Glyma.13G190400 Glycine max HOM05M000010 ORTHO05M000491 3.4e-07 58.2 95 38.9
Glyma.13G192100 Glycine max HOM05M000010 ORTHO05M000491 3.4e-07 58.2 104 34.6
Aco007217 Ananas comosus HOM05M000010 ORTHO05M000491 4.5e-07 57.8 104 35.6
Glyma.U031502 Glycine max HOM05M000010 ORTHO05M002781 4.5e-07 57.8 94 36.2
Potri.017G015600 Populus trichocarpa HOM05M000010 ORTHO05M000491 4.5e-07 57.8 93 37.6
CALSI_Maker00030166 Calamus simplicifolius HOM05M000010 ORTHO05M000491 5.9e-07 57.4 120 31.7
p5.00_sc00189_p0001 Elaeis guineensis HOM05M000010 ORTHO05M000491 5.9e-07 57.4 95 37.9
Glyma.03G043000 Glycine max HOM05M000010 ORTHO05M000491 5.9e-07 57.4 96 38.5
Glyma.U031106 Glycine max HOM05M000010 ORTHO05M002781 5.9e-07 57.4 96 35.4
Solyc11g040410.1 Solanum lycopersicum HOM05M000010 ORTHO05M015500 5.9e-07 57.4 37 75.7
Glyma.13G190000 Glycine max HOM05M000010 ORTHO05M000491 7.7e-07 57.0 99 37.4
AT3G14470 Arabidopsis thaliana HOM05M000010 ORTHO05M000491 1.0e-06 56.6 94 35.1
p5.00_sc00099_p0121 Elaeis guineensis HOM05M000010 ORTHO05M000803 1.0e-06 56.6 61 47.5
Glyma.03G043080 Glycine max HOM05M000010 ORTHO05M000491 1.0e-06 56.6 94 35.1
Glyma.03G043500 Glycine max HOM05M000010 ORTHO05M000491 1.0e-06 56.6 94 35.1
Glyma.03G043600 Glycine max HOM05M000010 ORTHO05M000491 1.0e-06 56.6 94 35.1
Glyma.03G044150 Glycine max HOM05M000010 ORTHO05M000491 1.0e-06 56.6 94 35.1
Potri.004G194800 Populus trichocarpa HOM05M000010 ORTHO05M000491 1.0e-06 56.6 104 38.5
CALSI_Maker00043458 Calamus simplicifolius HOM05M000010 ORTHO05M000320 1.3e-06 56.2 89 34.8
Glyma.13G190800 Glycine max HOM05M000010 ORTHO05M000491 1.3e-06 56.2 97 36.1
Glyma.13G188300 Glycine max HOM05M000010 ORTHO05M000491 1.7e-06 55.8 102 31.4
p5.00_sc13874_p0001 Elaeis guineensis HOM05M000010 ORTHO05M000803 2.2e-06 55.5 59 45.8
Glyma.03G043200 Glycine max HOM05M000010 ORTHO05M000491 2.9e-06 55.1 94 35.1
CALSI_Maker00044463 Calamus simplicifolius HOM05M000010 ORTHO05M011233 3.8e-06 54.7 113 33.6
CALSI_Maker00044472 Calamus simplicifolius HOM05M000010 ORTHO05M011233 5.0e-06 54.3 101 35.6
CALSI_Maker00044489 Calamus simplicifolius HOM05M000010 ORTHO05M011233 5.0e-06 54.3 113 34.5
Glyma.13G184900 Glycine max HOM05M000010 ORTHO05M000491 5.0e-06 54.3 95 36.8
CALSI_Maker00018527 Calamus simplicifolius HOM05M000010 ORTHO05M000320 6.5e-06 53.9 109 28.4
Glyma.13G193300 Glycine max HOM05M000010 ORTHO05M000491 6.5e-06 53.9 105 31.4
Glyma.13G194100 Glycine max HOM05M000010 ORTHO05M000491 6.5e-06 53.9 105 31.4
CALSI_Maker00042669 Calamus simplicifolius HOM05M000010 ORTHO05M002781 8.5e-06 53.5 60 40.0
p5.00_sc00414_p0006 Elaeis guineensis HOM05M000010 ORTHO05M000803 8.5e-06 53.5 108 33.3
Glyma.03G075200 Glycine max HOM05M000010 ORTHO05M000491 8.5e-06 53.5 100 35.0
PH02Gene41113 Phyllostachys edulis HOM05M000010 ORTHO05M000803 8.5e-06 53.5 60 41.7
PH02Gene41114 Phyllostachys edulis HOM05M000010 ORTHO05M000803 8.5e-06 53.5 60 41.7


User provided reference genes

Program Settings