Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g051120.3 Solanum lycopersicum HOM05M000031 ORTHO05M249471 8.6e-81 302.8 145 100.0
Solyc06g064960.3 Solanum lycopersicum HOM05M000031 ORTHO05M002777 2.7e-18 95.1 132 42.4
Solyc06g064970.4 Solanum lycopersicum HOM05M000031 ORTHO05M002777 6.1e-18 94.0 138 38.4
Glyma.15G183000 Glycine max HOM05M000031 ORTHO05M002777 1.5e-16 89.4 139 41.7
Solyc06g064990.2 Solanum lycopersicum HOM05M000031 ORTHO05M002777 1.5e-16 89.4 133 38.3
Solyc06g064980.3 Solanum lycopersicum HOM05M000031 ORTHO05M002777 2.6e-16 88.6 134 38.8
Glyma.09G074000 Glycine max HOM05M000031 ORTHO05M002777 4.4e-16 87.8 134 38.8
Glyma.07G044200 Glycine max HOM05M000031 ORTHO05M002777 5.7e-16 87.4 133 41.4
Glyma.16G012500 Glycine max HOM05M000031 ORTHO05M002777 9.7e-16 86.7 133 40.6
Solyc11g051060.2 Solanum lycopersicum HOM05M000031 ORTHO05M002777 4.8e-15 84.3 136 38.2
Potri.017G134601 Populus trichocarpa HOM05M000031 ORTHO05M002777 8.2e-15 83.6 141 38.3
Potri.018G063901 Populus trichocarpa HOM05M000031 ORTHO05M002777 1.4e-14 82.8 141 39.7
Potri.017G134701 Populus trichocarpa HOM05M000031 ORTHO05M002777 9.1e-14 80.1 141 36.9
p5.00_sc00064_p0066 Elaeis guineensis HOM05M000031 ORTHO05M002777 1.5e-13 79.3 137 39.4
Solyc06g065010.4 Solanum lycopersicum HOM05M000031 ORTHO05M002777 2.6e-13 78.6 137 37.2
ATR0681G152 Amborella trichopoda HOM05M000031 ORTHO05M002777 7.7e-13 77.0 135 35.6
Potri.003G071500 Populus trichocarpa HOM05M000031 ORTHO05M002777 7.7e-13 77.0 137 38.7
CALSI_Maker00005731 Calamus simplicifolius HOM05M000031 ORTHO05M002777 2.2e-12 75.5 137 38.7
Potri.013G065100 Populus trichocarpa HOM05M000031 ORTHO05M002777 3.8e-12 74.7 138 35.5
AT5G40990 Arabidopsis thaliana HOM05M000031 ORTHO05M002777 8.5e-12 73.6 132 34.1
Glyma.07G044100 Glycine max HOM05M000031 ORTHO05M002777 1.1e-11 73.2 144 36.1
Glyma.15G264300 Glycine max HOM05M000031 ORTHO05M002777 1.9e-11 72.4 137 34.3
DDU467G0005 Dioscorea dumetorum HOM05M000031 ORTHO05M002777 2.5e-11 72.0 144 33.3
DDU550G0258 Dioscorea dumetorum HOM05M000031 ORTHO05M002777 2.5e-11 72.0 144 33.3
HPP92_002377 Vanilla planifolia HOM05M000031 ORTHO05M002777 2.5e-11 72.0 139 37.4
Glyma.15G264200 Glycine max HOM05M000031 ORTHO05M002777 3.2e-11 71.6 137 34.3
Potri.003G071400 Populus trichocarpa HOM05M000031 ORTHO05M002777 5.5e-11 70.9 136 34.6
Solyc12g049550.2 Solanum lycopersicum HOM05M000031 ORTHO05M002777 1.2e-10 69.7 128 36.7
evm.TU.AsparagusV1_06.355.V1.1 Asparagus officinalis HOM05M000031 ORTHO05M002777 2.1e-10 68.9 133 33.8
Glyma.19G262900 Glycine max HOM05M000031 ORTHO05M002777 2.1e-10 68.9 136 32.4
ATR0317G003 Amborella trichopoda HOM05M000031 ORTHO05M002777 6.1e-10 67.4 140 34.3
AT3G14225 Arabidopsis thaliana HOM05M000031 ORTHO05M002777 7.9e-10 67.0 134 30.6
AT1G53920 Arabidopsis thaliana HOM05M000031 ORTHO05M002777 1.8e-09 65.9 135 33.3
Potri.017G136601 Populus trichocarpa HOM05M000031 ORTHO05M002777 1.8e-09 65.9 135 37.8
AT1G53990 Arabidopsis thaliana HOM05M000031 ORTHO05M002777 2.3e-09 65.5 134 31.3
ATR0582G356 Amborella trichopoda HOM05M000031 ORTHO05M002777 5.2e-09 64.3 143 30.1
Glyma.03G263900 Glycine max HOM05M000031 ORTHO05M002777 8.8e-09 63.5 135 32.6
Glyma.19G079700 Glycine max HOM05M000031 ORTHO05M002777 1.1e-08 63.2 136 30.9
TraesCS4A03G0991200 Triticum aestivum HOM05M000031 ORTHO05M001255 1.1e-08 63.2 107 32.7
TraesCS7A03G0238700 Triticum aestivum HOM05M000031 ORTHO05M001255 1.1e-08 63.2 107 32.7
TRIDC7AG011630 Triticum dicoccoides HOM05M000031 ORTHO05M001255 1.1e-08 63.2 107 32.7
TRITD4Av1G231510 Triticum turgidum HOM05M000031 ORTHO05M001255 1.1e-08 63.2 107 32.7
Pp3c11_25640 Physcomitrium patens HOM05M000031 ORTHO05M002777 2.0e-08 62.4 137 32.8
Potri.004G084366 Populus trichocarpa HOM05M000031 ORTHO05M002777 2.0e-08 62.4 141 34.8
Potri.004G084500 Populus trichocarpa HOM05M000031 ORTHO05M002777 2.0e-08 62.4 141 34.8
V3.Lp_chr7_0.1G920 Lolium perenne HOM05M000031 ORTHO05M001255 2.6e-08 62.0 135 30.4
Asa6G05247 Allium sativum HOM05M000031 ORTHO05M000572 4.4e-08 61.2 145 29.7
Pp3c8_1460 Physcomitrium patens HOM05M000031 ORTHO05M001255 4.4e-08 61.2 136 31.6
Potri.017G136501 Populus trichocarpa HOM05M000031 ORTHO05M002777 4.4e-08 61.2 138 34.8
Potri.017G137000 Populus trichocarpa HOM05M000031 ORTHO05M002777 4.4e-08 61.2 138 34.8
Solyc04g024840.3 Solanum lycopersicum HOM05M000031 ORTHO05M002777 5.7e-08 60.8 138 31.2
TRITD4Av1G231670 Triticum turgidum HOM05M000031 ORTHO05M001255 9.7e-08 60.1 107 33.6
Sspon.04G0006590-1A Saccharum spontaneum HOM05M000031 ORTHO05M000558 1.3e-07 59.7 126 34.1
MBI19_g29446_MAGBIO Magnolia biondii HOM05M000031 ORTHO05M000592 2.2e-07 58.9 138 29.0
Mapoly0042s0126 Marchantia polymorpha HOM05M000031 ORTHO05M002777 2.2e-07 58.9 133 30.1
Misin07G439100 Miscanthus sinensis HOM05M000031 ORTHO05M004441 2.2e-07 58.9 126 34.1
Sspon.04G0012140-4D Saccharum spontaneum HOM05M000031 ORTHO05M004441 2.2e-07 58.9 126 34.1
Horvu_MOREX_2H01G013400 Hordeum vulgare HOM05M000031 ORTHO05M001255 2.8e-07 58.5 107 31.8
Sobic.004G286800 Sorghum bicolor HOM05M000031 ORTHO05M004441 2.8e-07 58.5 124 35.5
AET7Gv20257100 Aegilops tauschii HOM05M000031 ORTHO05M001255 3.7e-07 58.2 107 31.8
Mapoly0007s0041 Marchantia polymorpha HOM05M000031 ORTHO05M001255 3.7e-07 58.2 141 31.2
Sspon.04G0006590-1T Saccharum spontaneum HOM05M000031 ORTHO05M004441 3.7e-07 58.2 126 34.1
TraesCS7D03G0215000 Triticum aestivum HOM05M000031 ORTHO05M001255 3.7e-07 58.2 107 31.8
OB02G34610 Oryza brachyantha HOM05M000031 ORTHO05M004441 4.8e-07 57.8 125 30.4
SMO119G0115 Selaginella moellendorffii HOM05M000031 ORTHO05M001255 4.8e-07 57.8 143 28.0
AT1G53940 Arabidopsis thaliana HOM05M000031 ORTHO05M002777 6.3e-07 57.4 135 28.9
GWHGASIY021861 Secale cereale HOM05M000031 ORTHO05M001255 6.3e-07 57.4 134 30.6
GWHGASIY039675 Secale cereale HOM05M000031 ORTHO05M001255 6.3e-07 57.4 134 30.6
Horvu_MOREX_7H01G103500 Hordeum vulgare HOM05M000031 ORTHO05M001255 8.2e-07 57.0 107 30.8
Potri.017G134350 Populus trichocarpa HOM05M000031 ORTHO05M002777 8.2e-07 57.0 105 35.2
TraesCS4A03G0990900 Triticum aestivum HOM05M000031 ORTHO05M001255 8.2e-07 57.0 107 31.8
Asa2G01674 Allium sativum HOM05M000031 ORTHO05M000558 1.1e-06 56.6 135 29.6
Horvu_MOREX_6H01G003700 Hordeum vulgare HOM05M000031 ORTHO05M001255 1.1e-06 56.6 104 30.8
GWHGASIY021857 Secale cereale HOM05M000031 ORTHO05M001255 1.1e-06 56.6 134 30.6
SMO364G0638 Selaginella moellendorffii HOM05M000031 ORTHO05M000508 1.1e-06 56.6 140 28.6
HPP92_002392 Vanilla planifolia HOM05M000031 ORTHO05M002777 1.4e-06 56.2 146 32.2
Horvu_MOREX_7H01G103800 Hordeum vulgare HOM05M000031 ORTHO05M001255 1.8e-06 55.8 132 29.5
Potri.017G132200 Populus trichocarpa HOM05M000031 ORTHO05M002777 1.8e-06 55.8 53 49.1
GWHGASIY021858 Secale cereale HOM05M000031 ORTHO05M001255 1.8e-06 55.8 134 29.1
Zosma05g05510 Zostera marina HOM05M000031 ORTHO05M000558 1.8e-06 55.8 139 29.5
SMO115G0070 Selaginella moellendorffii HOM05M000031 ORTHO05M002777 2.4e-06 55.5 137 28.5
Horvu_MOREX_7H01G103000 Hordeum vulgare HOM05M000031 ORTHO05M001255 3.1e-06 55.1 135 29.6
SEGI_39645 Sequoiadendron giganteum HOM05M000031 ORTHO05M000592 3.1e-06 55.1 134 28.4
CALSI_Maker00036242 Calamus simplicifolius HOM05M000031 ORTHO05M000592 4.1e-06 54.7 137 29.2
Glyma.15G182900 Glycine max HOM05M000031 ORTHO05M002777 4.1e-06 54.7 76 40.8
MBI19_g37994_MAGBIO Magnolia biondii HOM05M000031 ORTHO05M002777 4.1e-06 54.7 93 38.7
TraesCS7A03G0237900 Triticum aestivum HOM05M000031 ORTHO05M001255 4.1e-06 54.7 107 30.8
TRIDC7AG011590 Triticum dicoccoides HOM05M000031 ORTHO05M001255 4.1e-06 54.7 107 30.8
TRIDC7AG011610 Triticum dicoccoides HOM05M000031 ORTHO05M001255 4.1e-06 54.7 107 30.8
TRITD7Av1G029020 Triticum turgidum HOM05M000031 ORTHO05M001255 4.1e-06 54.7 107 30.8
Mapoly0042s0125 Marchantia polymorpha HOM05M000031 ORTHO05M002777 5.3e-06 54.3 134 27.6
GWHGAZTO096624 Oryza alta HOM05M000031 ORTHO05M000592 5.3e-06 54.3 135 28.9
Solyc01g111960.3 Solanum lycopersicum HOM05M000031 ORTHO05M000558 5.3e-06 54.3 136 30.1
Solyc10g008810.3 Solanum lycopersicum HOM05M000031 ORTHO05M000572 5.3e-06 54.3 137 27.0
TraesCS4A03G0991100 Triticum aestivum HOM05M000031 ORTHO05M001255 5.3e-06 54.3 134 29.9
TRIDC4AG057430 Triticum dicoccoides HOM05M000031 ORTHO05M001255 5.3e-06 54.3 134 29.9
TRITD4Av1G231520 Triticum turgidum HOM05M000031 ORTHO05M001255 5.3e-06 54.3 134 29.9
Bradi1g50927 Brachypodium distachyon HOM05M000031 ORTHO05M001255 7.0e-06 53.9 105 33.3
EJB05_44476 Eragrostis curvula HOM05M000031 ORTHO05M009515 7.0e-06 53.9 133 30.8
Asa5G04286 Allium sativum HOM05M000031 ORTHO05M000558 9.1e-06 53.5 134 29.9
ATR0681G194 Amborella trichopoda HOM05M000031 ORTHO05M002777 9.1e-06 53.5 142 31.0
evm.TU.AsparagusV1_01.2401.V1.1 Asparagus officinalis HOM05M000031 ORTHO05M001255 9.1e-06 53.5 123 30.9
Mapoly0031s0054 Marchantia polymorpha HOM05M000031 ORTHO05M005921 9.1e-06 53.5 138 29.7
Pp3c14_11270 Physcomitrium patens HOM05M000031 ORTHO05M000508 9.1e-06 53.5 146 27.4
GWHGASIY021859 Secale cereale HOM05M000031 ORTHO05M001255 9.1e-06 53.5 134 29.9
GWHGASIY025678 Secale cereale HOM05M000031 ORTHO05M000592 9.1e-06 53.5 137 26.3
TraesCS6D03G0573200 Triticum aestivum HOM05M000031 ORTHO05M004441 9.1e-06 53.5 125 30.4


User provided reference genes

Program Settings