Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g050760.2 Solanum lycopersicum HOM05M001115 ORTHO05M010473 3.0e-60 234.2 114 100.0
Solyc00g500041.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 2.4e-54 214.5 112 93.8
Solyc00g500086.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.6e-53 211.8 113 91.2
Solyc00g500123.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.6e-53 211.8 113 91.2
Solyc00g500193.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.6e-53 211.8 113 91.2
Solyc11g021230.1 Solanum lycopersicum HOM05M001115 ORTHO05M010473 3.9e-52 207.2 111 90.1
Aco030998 Ananas comosus HOM05M001115 ORTHO05M005454 3.1e-49 197.6 107 88.8
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 6.8e-49 196.4 109 86.2
MBI10_g47594_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 7.6e-48 193.0 113 83.2
ATCG01100 Arabidopsis thaliana HOM05M001115 ORTHO05M007197 3.2e-46 187.6 105 83.8
TRITD3Bv1G075920 Triticum turgidum HOM05M001115 ORTHO05M007197 1.3e-44 182.2 109 82.6
TRIDC4AG060020 Triticum dicoccoides HOM05M001115 ORTHO05M010473 6.6e-44 179.9 109 81.7
GWHGASIY019875 Secale cereale HOM05M001115 ORTHO05M007197 1.1e-43 179.1 109 79.8
Ot_Un168_gn40612 Oropetium thomaeum HOM05M001115 ORTHO05M010473 4.3e-43 177.2 108 82.4
Zm00007a00002175 Zea mays B104 HOM05M001115 ORTHO05M005596 2.1e-42 174.9 108 79.6
Solyc02g080275.1 Solanum lycopersicum HOM05M001115 ORTHO05M010473 3.8e-39 164.1 90 92.2
MBI10_g47589_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 2.1e-34 148.3 113 66.4
Pahal.3G033500 Panicum hallii HOM05M001115 ORTHO05M010473 4.2e-30 134.0 85 81.2
TRIDC1AG031520 Triticum dicoccoides HOM05M001115 ORTHO05M010473 1.6e-29 132.1 82 81.7
TRIDC4AG020390 Triticum dicoccoides HOM05M001115 ORTHO05M010473 5.3e-25 117.1 82 75.6
Zm00007a00022331 Zea mays B104 HOM05M001115 ORTHO05M007197 9.9e-24 112.8 85 70.6
Asa0G04479 Allium sativum HOM05M001115 ORTHO05M007197 4.9e-23 110.5 62 80.6
Bradi2g03103 Brachypodium distachyon HOM05M001115 ORTHO05M010473 2.4e-22 108.2 96 58.3
Solyc02g011790.2 Solanum lycopersicum HOM05M001115 ORTHO05M010473 3.2e-22 107.8 109 56.0
SMO086G0018 Selaginella moellendorffii HOM05M001115 ORTHO05M007197 5.4e-22 107.1 85 63.5
OsKitaake02g148901 Oryza sativa Kitaake HOM05M001115 ORTHO05M007197 1.0e-20 102.8 86 65.1
Glyma.18G155550 Glycine max HOM05M001115 ORTHO05M010473 7.4e-19 96.7 64 78.1
AET4Gv20041400 Aegilops tauschii HOM05M001115 ORTHO05M010473 2.9e-15 84.7 40 90.0
Ot_Un6_gn41088 Oropetium thomaeum HOM05M001115 ORTHO05M007197 1.3e-12 75.9 105 39.0
Ot_Un6_gn41091 Oropetium thomaeum HOM05M001115 ORTHO05M007308 1.3e-12 75.9 105 39.0
Zosma07g02600 Zostera marina HOM05M002778 ORTHO05M005786 8.7e-12 73.2 97 37.1
Zm00007a00017135 Zea mays B104 HOM05M001115 ORTHO05M005596 2.4e-09 65.1 90 46.7
Ot_Un4_gn40982 Oropetium thomaeum HOM05M001115 ORTHO05M004321 5.3e-09 63.9 74 48.6
DexiUA01G0026120 Digitaria exilis HOM05M001115 ORTHO05M007197 1.5e-08 62.4 81 39.5
Ot_Un39_gn40867 Oropetium thomaeum HOM05M001115 ORTHO05M010473 1.3e-07 59.3 81 38.3
Mapoly0013s0013 Marchantia polymorpha HOM05M003646 ORTHO05M004321 4.2e-06 54.3 64 43.8


User provided reference genes

Program Settings