Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g039805.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 3.7e-67 257.3 130 100.0
Solyc11g067320.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 2.4e-10 68.6 127 39.4
Solyc11g067343.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 1.6e-09 65.9 127 38.6
Potri.011G048100 Populus trichocarpa HOM05M000160 ORTHO05M000100 6.7e-08 60.5 126 36.5
Solyc05g013010.3 Solanum lycopersicum HOM05M000160 ORTHO05M000100 8.7e-08 60.1 107 36.4
AT3G45080 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 5.6e-07 57.4 101 34.7
Potri.011G049100 Populus trichocarpa HOM05M000160 ORTHO05M000100 5.6e-07 57.4 126 34.1
Solyc05g012955.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 5.6e-07 57.4 107 34.6
Potri.011G048400 Populus trichocarpa HOM05M000160 ORTHO05M000100 7.4e-07 57.0 126 34.1
Solyc03g006043.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 7.4e-07 57.0 101 37.6
Solyc03g006047.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 7.4e-07 57.0 101 37.6
Aco019300 Ananas comosus HOM05M000160 ORTHO05M000100 9.6e-07 56.6 117 30.8
AT1G28170 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 9.6e-07 56.6 126 34.1
OB01G22850 Oryza brachyantha HOM05M000160 ORTHO05M000100 9.6e-07 56.6 122 30.3
AT2G03760 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 1.6e-06 55.8 125 32.8
AT3G45070 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 1.6e-06 55.8 93 35.5
Asa4G05430 Allium sativum HOM05M000160 ORTHO05M000100 2.1e-06 55.5 118 30.5
Asa4G05443 Allium sativum HOM05M000160 ORTHO05M000100 2.1e-06 55.5 93 35.5
Potri.011G048712 Populus trichocarpa HOM05M000160 ORTHO05M000100 2.1e-06 55.5 127 33.9
Potri.011G048200 Populus trichocarpa HOM05M000160 ORTHO05M000100 2.8e-06 55.1 126 33.3
TraesCS2B03G1001500 Triticum aestivum HOM05M000160 ORTHO05M000100 2.8e-06 55.1 105 29.5
Potri.011G048300 Populus trichocarpa HOM05M000160 ORTHO05M000100 3.7e-06 54.7 126 34.9
AT1G13420 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 4.8e-06 54.3 91 35.2
OsKitaake08g211500 Oryza sativa Kitaake HOM05M000160 ORTHO05M000100 4.8e-06 54.3 121 31.4
Asa0G03664 Allium sativum HOM05M000160 ORTHO05M000100 6.2e-06 53.9 117 29.9
AT2G03750 Arabidopsis thaliana HOM05M000160 ORTHO05M000100 8.2e-06 53.5 114 33.3
Solyc05g011870.1 Solanum lycopersicum HOM05M000160 ORTHO05M000100 8.2e-06 53.5 102 34.3
TRIDC2BG057060 Triticum dicoccoides HOM05M000160 ORTHO05M000100 8.2e-06 53.5 105 28.6

Aegilops tauschii (0 genes)
Allium sativum (3 genes)
Amborella trichopoda (0 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (6 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (6 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (8 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (1 genes)
Triticum dicoccoides (1 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings