Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021230.1 Solanum lycopersicum HOM05M001115 ORTHO05M010473 4.4e-101 370.5 188 100.0
Solyc00g500041.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 7.7e-90 333.2 176 95.5
Solyc00g500086.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.5e-88 328.9 176 93.8
Solyc00g500123.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.5e-88 328.9 176 93.8
Solyc00g500193.1 Solanum lycopersicum HOM05M001115 ORTHO05M007197 1.5e-88 328.9 176 93.8
ATCG01100 Arabidopsis thaliana HOM05M001115 ORTHO05M007197 5.5e-80 300.4 188 81.4
Aco030998 Ananas comosus HOM05M001115 ORTHO05M005454 2.7e-74 281.6 160 85.6
MBI10_g47594_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 4.5e-74 280.8 161 85.7
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 2.3e-73 278.5 161 83.9
TRITD3Bv1G075920 Triticum turgidum HOM05M001115 ORTHO05M007197 2.3e-73 278.5 187 76.5
GWHGASIY019875 Secale cereale HOM05M001115 ORTHO05M007197 1.5e-72 275.8 176 78.4
TRIDC4AG060020 Triticum dicoccoides HOM05M001115 ORTHO05M010473 1.9e-72 275.4 180 77.8
Ot_Un168_gn40612 Oropetium thomaeum HOM05M001115 ORTHO05M010473 2.8e-71 271.6 175 79.4
Solyc02g080275.1 Solanum lycopersicum HOM05M001115 ORTHO05M010473 8.3e-68 260.0 139 94.2
MBI10_g47589_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 1.3e-60 236.1 161 74.5
Solyc11g050760.2 Solanum lycopersicum HOM05M001115 ORTHO05M010473 6.4e-52 207.2 111 90.1
Bradi2g03103 Brachypodium distachyon HOM05M001115 ORTHO05M010473 7.8e-50 200.3 164 64.6
Zm00007a00002175 Zea mays B104 HOM05M001115 ORTHO05M005596 3.4e-45 184.9 108 81.5
SMO086G0018 Selaginella moellendorffii HOM05M001115 ORTHO05M007197 1.2e-39 166.4 176 54.5
Solyc02g011790.2 Solanum lycopersicum HOM05M001115 ORTHO05M010473 2.6e-37 158.7 162 58.6
Glyma.18G155550 Glycine max HOM05M001115 ORTHO05M010473 4.9e-36 154.5 125 69.6
OsKitaake02g148901 Oryza sativa Kitaake HOM05M001115 ORTHO05M007197 4.2e-35 151.4 124 66.9
Pahal.3G033500 Panicum hallii HOM05M001115 ORTHO05M010473 3.9e-33 144.8 85 83.5
TRIDC1AG031520 Triticum dicoccoides HOM05M001115 ORTHO05M010473 1.3e-31 139.8 82 80.5
TRIDC4AG020390 Triticum dicoccoides HOM05M001115 ORTHO05M010473 1.4e-27 126.3 95 69.5
Zm00007a00022331 Zea mays B104 HOM05M001115 ORTHO05M007197 6.0e-26 120.9 85 71.8
Asa0G04479 Allium sativum HOM05M001115 ORTHO05M007197 7.9e-26 120.6 70 78.6
GWHGAORA055683 Cenchrus purpureus HOM05M001115 ORTHO05M010473 4.0e-22 108.2 178 43.8
TraesCS4A03G0393500 Triticum aestivum HOM05M001115 ORTHO05M010473 4.9e-20 101.3 71 76.1
TRITD4Av1G093820 Triticum turgidum HOM05M001115 ORTHO05M010473 4.9e-20 101.3 71 76.1
TRIDC3BG067860 Triticum dicoccoides HOM05M001115 ORTHO05M010473 8.4e-20 100.5 73 74.0
Horvu_MOREX_3H01G394400 Hordeum vulgare HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS1B03G0229500 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS2D03G0545100 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS3A03G1000000 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS3B03G1133600 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS3B03G1456600 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS3B03G1456700 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCSU03G0313800 Triticum aestivum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TRITD1Bv1G042900 Triticum turgidum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TRITD3Av1G245790 Triticum turgidum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TRITD3Bv1G234120 Triticum turgidum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TRITD3Bv1G274550 Triticum turgidum HOM05M001115 ORTHO05M010473 2.4e-19 99.0 71 74.6
TraesCS1B03G1091300 Triticum aestivum HOM05M001115 ORTHO05M010473 4.2e-19 98.2 71 73.2
TRIDC7BG017880 Triticum dicoccoides HOM05M001115 ORTHO05M010473 4.2e-19 98.2 71 73.2
TraesCS5B03G0650400 Triticum aestivum HOM05M001115 ORTHO05M010473 5.5e-19 97.8 69 73.9
TRIDC1AG019730 Triticum dicoccoides HOM05M001115 ORTHO05M010473 5.5e-19 97.8 60 85.0
TraesCS3B03G0454700 Triticum aestivum HOM05M001115 ORTHO05M010473 7.1e-19 97.4 71 73.2
TraesCS5A03G0142700 Triticum aestivum HOM05M001115 ORTHO05M010473 1.6e-18 96.3 71 73.2
TraesCS1A03G0328600 Triticum aestivum HOM05M001115 ORTHO05M010473 2.1e-18 95.9 60 83.3
TRITD1Av1G065330 Triticum turgidum HOM05M001115 ORTHO05M010473 2.1e-18 95.9 60 83.3
V3.Lp_chr7_0.1G1256 Lolium perenne HOM05M001115 ORTHO05M010473 2.7e-18 95.5 60 83.3
Misin11G090700 Miscanthus sinensis HOM05M001115 ORTHO05M010473 6.0e-18 94.4 61 80.3
Ot_Un39_gn40867 Oropetium thomaeum HOM05M001115 ORTHO05M010473 5.1e-17 91.3 140 38.6
TraesCS7A03G0700000 Triticum aestivum HOM05M001115 ORTHO05M010473 8.7e-17 90.5 71 71.8
TRITD1Av1G135290 Triticum turgidum HOM05M001115 ORTHO05M010473 8.7e-17 90.5 71 70.4
AET4Gv20041400 Aegilops tauschii HOM05M001115 ORTHO05M010473 2.1e-15 85.9 40 90.0
Ot_Un6_gn41088 Oropetium thomaeum HOM05M001115 ORTHO05M007197 6.2e-15 84.3 110 40.0
Ot_Un6_gn41091 Oropetium thomaeum HOM05M001115 ORTHO05M007308 6.2e-15 84.3 110 40.0
Asa0G03809 Allium sativum HOM05M007431 ORTHO05M007587 8.1e-15 84.0 50 84.0
Zosma07g02600 Zostera marina HOM05M002778 ORTHO05M005786 7.6e-13 77.4 179 33.0
Aco031707 Ananas comosus HOM05M001115 ORTHO05M005596 2.9e-12 75.5 45 82.2
Ot_Un4_gn40982 Oropetium thomaeum HOM05M001115 ORTHO05M004321 3.2e-11 72.0 108 40.7
Zm00007a00017135 Zea mays B104 HOM05M001115 ORTHO05M005596 3.2e-11 72.0 90 47.8
DexiUA01G0026120 Digitaria exilis HOM05M001115 ORTHO05M007197 9.3e-11 70.5 76 44.7
Mapoly0013s0013 Marchantia polymorpha HOM05M003646 ORTHO05M004321 4.3e-08 61.6 64 46.9
Asa5G03912 Allium sativum HOM05M001115 ORTHO05M010473 9.6e-08 60.5 59 55.9
EJB05_22707 Eragrostis curvula HOM05M001115 ORTHO05M010473 4.1e-06 55.1 33 72.7


User provided reference genes

Program Settings