Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021195.1 Solanum lycopersicum HOM05M001634 ORTHO05M001555 3.0e-51 204.1 106 100.0
Solyc01g017090.2 Solanum lycopersicum HOM05M001634 ORTHO05M001555 2.9e-33 144.4 105 77.1
Solyc03g013620.1 Solanum lycopersicum HOM05M001634 ORTHO05M001555 6.0e-31 136.7 105 75.2
Potri.001G342933 Populus trichocarpa HOM05M001634 ORTHO05M001555 7.6e-26 119.8 105 61.9
ATCG01010 Arabidopsis thaliana HOM05M001634 ORTHO05M001555 9.9e-26 119.4 105 61.9
AET3Gv21147800 Aegilops tauschii HOM05M001634 ORTHO05M001555 1.3e-25 119.0 105 60.0
OsKitaake10g165835 Oryza sativa Kitaake HOM05M001634 ORTHO05M001555 2.9e-25 117.9 105 59.0
OsR498G0022237600.01 Oryza sativa ssp. indica HOM05M001634 ORTHO05M001555 2.9e-25 117.9 105 59.0
OsR498G0306679100.01 Oryza sativa ssp. indica HOM05M001634 ORTHO05M001555 2.9e-25 117.9 105 59.0
Zm00007a00022333 Zea mays B104 HOM05M001634 ORTHO05M001555 2.9e-25 117.9 105 59.0
Zm00007a00050354 Zea mays B104 HOM05M001634 ORTHO05M001555 2.9e-25 117.9 105 59.0
GWHGASIY001718 Secale cereale HOM05M001634 ORTHO05M001555 4.9e-25 117.1 105 59.0
Potri.011G084150 Populus trichocarpa HOM05M001634 ORTHO05M001555 6.4e-25 116.7 104 61.5
OsKitaake10g165816 Oryza sativa Kitaake HOM05M001634 ORTHO05M001555 8.4e-25 116.3 105 59.0
TRIDC4AG020330 Triticum dicoccoides HOM05M001634 ORTHO05M001555 8.4e-25 116.3 105 58.1
Ot_Chr7_gn38087 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Chr7_gn38088 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un136_gn40113 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un168_gn40557 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un169_gn40626 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un171_gn40675 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un3_gn40882 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Ot_Un9_gn41192 Oropetium thomaeum HOM05M001634 ORTHO05M001555 3.2e-24 114.4 105 58.1
Aco024831 Ananas comosus HOM05M001634 ORTHO05M001555 4.1e-24 114.0 105 61.0
V3.Lp_chr7_0.1G8386 Lolium perenne HOM05M001634 ORTHO05M001555 7.1e-24 113.2 105 57.1
MisinT368800 Miscanthus sinensis HOM05M001634 ORTHO05M001555 7.1e-24 113.2 101 58.4
Bradi1g05707 Brachypodium distachyon HOM05M001634 ORTHO05M001555 2.7e-23 111.3 105 56.2
TRIDC3AG071600 Triticum dicoccoides HOM05M001634 ORTHO05M001555 4.6e-23 110.5 105 56.2
AET0Gv20079400 Aegilops tauschii HOM05M001634 ORTHO05M001555 1.3e-22 109.0 77 68.8
Zm00007a00042567 Zea mays B104 HOM05M001634 ORTHO05M001555 2.1e-20 101.7 106 54.7
OsKitaake12g159400 Oryza sativa Kitaake HOM05M001634 ORTHO05M001555 8.4e-17 89.7 87 55.2
AET5Gv20754900 Aegilops tauschii HOM05M001634 ORTHO05M001555 1.0e-14 82.8 87 52.9
V3.Lp_chr7_0.1G10310 Lolium perenne HOM05M001634 ORTHO05M001555 7.6e-10 66.6 58 58.6
V3.Lp_chr5_0G2956 Lolium perenne HOM05M001634 ORTHO05M001555 6.4e-09 63.5 58 56.9
GWHGAORA041959 Cenchrus purpureus HOM05M001634 ORTHO05M001555 1.4e-08 62.4 46 63.0
OB12G18420 Oryza brachyantha HOM05M001634 ORTHO05M001555 3.2e-08 61.2 57 52.6


User provided reference genes

Program Settings