Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021010.1 Solanum lycopersicum HOM05M018850 ORTHO05M000831 1.4e-93 345.5 174 100.0
Solyc06g082797.1 Solanum lycopersicum HOM05M018850 ORTHO05M000831 2.1e-65 251.9 134 93.3
Solyc05g015654.1 Solanum lycopersicum HOM05M000002 ORTHO05M000002 1.8e-61 238.8 134 90.3
Solyc09g061900.1 Solanum lycopersicum HOM05M018850 ORTHO05M000831 1.8e-48 195.7 116 87.1
Solyc05g050070.1 Solanum lycopersicum HOM05M000002 ORTHO05M000831 9.8e-15 83.6 122 32.0
SEGI_13448 Sequoiadendron giganteum HOM05M000002 ORTHO05M000002 1.0e-11 73.6 148 35.1
V3.Lp_chr6_0G14538 Lolium perenne HOM05M000002 ORTHO05M000831 1.9e-10 69.3 126 31.7
MBI09_g18618_MAGBIO Magnolia biondii HOM05M011716 ORTHO05M019774 1.1e-08 63.5 95 31.6
V3.Lp_chr5_0G15540 Lolium perenne HOM05M000002 ORTHO05M000831 1.4e-08 63.2 129 31.8
V3.Lp_chr4_0G25594 Lolium perenne HOM05M000002 ORTHO05M000002 4.0e-08 61.6 98 28.6
Aco007252 Ananas comosus HOM05M000640 ORTHO05M000513 6.8e-08 60.8 105 31.4
GWHGAZTO000488 Oryza alta HOM05M000002 ORTHO05M000831 6.8e-08 60.8 158 26.6
V3.Lp_chr2_0G21894 Lolium perenne HOM05M000612 ORTHO05M000514 8.9e-08 60.5 139 25.2
V3.Lp_chr2_0G6822 Lolium perenne HOM05M000002 ORTHO05M000002 1.5e-07 59.7 100 27.0
V3.Lp_chr4_0G10310 Lolium perenne HOM05M000002 ORTHO05M000831 1.5e-07 59.7 118 29.7
V3.Lp_chr6_0G3032 Lolium perenne HOM05M000002 ORTHO05M000002 1.5e-07 59.7 118 29.7
V3.Lp_chr2_0G12682 Lolium perenne HOM05M000002 ORTHO05M000002 2.0e-07 59.3 108 26.9
V3.Lp_chr2_0G22404 Lolium perenne HOM05M000002 ORTHO05M000831 2.0e-07 59.3 96 34.4
V3.Lp_chr7_0.1G1562 Lolium perenne HOM05M000002 ORTHO05M000002 2.0e-07 59.3 133 29.3
V3.Lp_scaffold_4504G4 Lolium perenne HOM05M000002 ORTHO05M000831 3.4e-07 58.5 107 33.6
DDU549G0021 Dioscorea dumetorum HOM05M000002 ORTHO05M000831 7.6e-07 57.4 113 29.2
V3.Lp_chr2_0G6830 Lolium perenne HOM05M000002 ORTHO05M000002 9.9e-07 57.0 94 37.2
V3.Lp_chr4_0G7064 Lolium perenne HOM05M000002 ORTHO05M000002 1.3e-06 56.6 97 32.0
DDU757G0016 Dioscorea dumetorum HOM05M000002 ORTHO05M000831 2.2e-06 55.8 120 29.2
GWHGAZTO086842 Oryza alta HOM05M000002 ORTHO05M000831 2.2e-06 55.8 123 29.3
AET6Gv20104800 Aegilops tauschii HOM05M000002 ORTHO05M000831 2.9e-06 55.5 127 26.0
Aco022887 Ananas comosus HOM05M011716 ORTHO05M002214 2.9e-06 55.5 120 30.8
V3.Lp_chr7_0.1G4786 Lolium perenne HOM05M000002 ORTHO05M000002 2.9e-06 55.5 124 29.8
V3.Lp_chr7_0.1G5984 Lolium perenne HOM05M000002 ORTHO05M000831 2.9e-06 55.5 90 31.1
V3.Lp_chr1_0G16090 Lolium perenne HOM05M000002 ORTHO05M000831 3.8e-06 55.1 118 33.1
V3.Lp_chr4_0G26470 Lolium perenne HOM05M000002 ORTHO05M000002 3.8e-06 55.1 123 30.1
Solyc10g038180.3 Solanum lycopersicum HOM05M000002 ORTHO05M000831 4.9e-06 54.7 66 37.9
AET5Gv20731200 Aegilops tauschii HOM05M000002 ORTHO05M000831 6.4e-06 54.3 127 25.2
AET6Gv21003100 Aegilops tauschii HOM05M000002 ORTHO05M000831 6.4e-06 54.3 127 26.0
V3.Lp_chr4_0G18604 Lolium perenne HOM05M000002 ORTHO05M000002 6.4e-06 54.3 94 30.9
Aco029168 Ananas comosus HOM05M011716 ORTHO05M002214 8.4e-06 53.9 132 31.8
V3.Lp_chr4_0G29806 Lolium perenne HOM05M000002 ORTHO05M000002 8.4e-06 53.9 154 31.8
Potri.013G098066 Populus trichocarpa HOM05M018850 ORTHO05M000831 8.4e-06 53.9 155 29.7


User provided reference genes

Program Settings