Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g018627.1 Solanum lycopersicum HOM05M013781 ORTHO05M251709 3.4e-59 230.7 118 100.0
V3.Lp_chr5_0G374 Lolium perenne HOM05M000002 ORTHO05M000002 2.3e-07 58.5 50 52.0
Solyc02g071387.1 Solanum lycopersicum HOM05M013781 ORTHO05M247315 2.3e-07 58.5 88 39.8
V3.Lp_chr5_0G1054 Lolium perenne HOM05M000002 ORTHO05M000002 3.0e-07 58.2 72 44.4
V3.Lp_chr4_0G3942 Lolium perenne HOM05M000002 ORTHO05M000002 8.7e-07 56.6 72 43.1
GWHGAZTO046721 Oryza alta HOM05M000002 ORTHO05M000002 8.7e-07 56.6 50 46.0
V3.Lp_chr1_0G10324 Lolium perenne HOM05M000002 ORTHO05M000002 1.9e-06 55.5 50 48.0
V3.Lp_chr1_0G3274 Lolium perenne HOM05M000002 ORTHO05M000002 1.9e-06 55.5 55 45.5
GWHGAZTO053357 Oryza alta HOM05M000002 ORTHO05M000002 1.9e-06 55.5 84 40.5
V3.Lp_chr2_0G4704 Lolium perenne HOM05M000002 ORTHO05M000002 2.5e-06 55.1 106 36.8
V3.Lp_chr2_0G11648 Lolium perenne HOM05M000002 ORTHO05M000002 3.3e-06 54.7 50 52.0
V3.Lp_chr3_0G15488 Lolium perenne HOM05M000002 ORTHO05M000002 3.3e-06 54.7 57 47.4
V3.Lp_chr3_0G22750 Lolium perenne HOM05M000002 ORTHO05M000002 4.3e-06 54.3 106 38.7
V3.Lp_chr6_0G12652 Lolium perenne HOM05M000002 ORTHO05M000002 4.3e-06 54.3 63 39.7
V3.Lp_chr1_0G10168 Lolium perenne HOM05M000002 ORTHO05M000002 5.7e-06 53.9 63 39.7
V3.Lp_chr4_0G2464 Lolium perenne HOM05M000002 ORTHO05M000002 5.7e-06 53.9 63 38.1
V3.Lp_chr5_0G1154 Lolium perenne HOM05M000002 ORTHO05M000002 5.7e-06 53.9 50 48.0
V3.Lp_chr5_0G17144 Lolium perenne HOM05M000002 ORTHO05M000002 5.7e-06 53.9 63 38.1
Sspon.01G0033640-1A Saccharum spontaneum HOM05M000002 ORTHO05M000002 5.7e-06 53.9 50 46.0
V3.Lp_chr3_0G13086 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 58 43.1
V3.Lp_chr3_0G2898 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 69 43.5
V3.Lp_chr4_0G20284 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 50 52.0
V3.Lp_chr5_0G4668 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 54 46.3
V3.Lp_chr5_0G9256 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 48 52.1
V3.Lp_chr6_0G17438 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 48 47.9
V3.Lp_chr6_0G8640 Lolium perenne HOM05M000002 ORTHO05M000002 7.4e-06 53.5 50 46.0
DDU521G0400 Dioscorea dumetorum HOM05M000002 ORTHO05M000002 9.7e-06 53.1 44 50.0
V3.Lp_chr4_0G27722 Lolium perenne HOM05M000002 ORTHO05M000002 9.7e-06 53.1 48 50.0

Aegilops tauschii (0 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (22 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (2 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (1 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings