Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012560.3 Solanum lycopersicum HOM05M003469 ORTHO05M000449 5.8e-155 550.1 272 100.0
Solyc11g012540.2 Solanum lycopersicum HOM05M002220 ORTHO05M000449 5.4e-68 261.2 231 57.6
Solyc11g012550.3 Solanum lycopersicum HOM05M000589 ORTHO05M000449 3.5e-51 205.3 169 64.5
Solyc09g005480.3 Solanum lycopersicum HOM05M002220 ORTHO05M000449 5.6e-33 144.8 252 38.9
Solyc02g091570.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 9.6e-33 144.1 246 37.8
Solyc09g005770.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 2.9e-29 132.5 187 42.8
Solyc11g008300.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 8.1e-24 114.4 127 52.0
Solyc02g094080.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 1.7e-21 106.7 224 33.5
Solyc09g091710.3 Solanum lycopersicum HOM05M002220 ORTHO05M000449 2.4e-15 86.3 248 26.6
Potri.001G035500 Populus trichocarpa HOM05M002220 ORTHO05M000449 2.6e-14 82.8 203 30.0
Solyc01g104940.2 Solanum lycopersicum HOM05M003469 ORTHO05M000449 4.5e-14 82.0 191 31.4
Solyc09g005520.2 Solanum lycopersicum HOM05M027782 ORTHO05M000449 5.9e-14 81.6 126 42.9
Solyc12g099550.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 1.0e-13 80.9 178 31.5
Solyc10g052710.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 6.5e-13 78.2 187 31.0
Glyma.15G101700 Glycine max HOM05M002220 ORTHO05M000449 8.4e-13 77.8 226 27.4
Potri.006G013000 Populus trichocarpa HOM05M002220 ORTHO05M000449 1.1e-12 77.4 190 31.1
Potri.001G262900 Populus trichocarpa HOM05M003469 ORTHO05M000449 1.4e-12 77.0 195 29.7
Solyc09g072910.3 Solanum lycopersicum HOM05M002220 ORTHO05M000449 7.2e-12 74.7 258 26.7
Solyc10g008580.1 Solanum lycopersicum HOM05M003469 ORTHO05M000449 9.3e-12 74.3 220 28.6
Potri.010G154500 Populus trichocarpa HOM05M002220 ORTHO05M000449 1.6e-11 73.6 194 27.8
Asa8G01001 Allium sativum HOM05M008547 ORTHO05M000449 2.7e-11 72.8 245 27.8
Solyc10g008450.2 Solanum lycopersicum HOM05M002220 ORTHO05M000449 3.5e-11 72.4 243 25.9
Potri.006G013200 Populus trichocarpa HOM05M002220 ORTHO05M000449 4.6e-11 72.0 209 27.8
MBI19_g26732_MAGBIO Magnolia biondii HOM05M000589 ORTHO05M000648 6.1e-11 71.6 186 29.6
Potri.010G154700 Populus trichocarpa HOM05M002220 ORTHO05M000449 6.1e-11 71.6 179 28.5
Potri.016G012500 Populus trichocarpa HOM05M002220 ORTHO05M000449 6.1e-11 71.6 179 28.5
Potri.016G012700 Populus trichocarpa HOM05M002220 ORTHO05M000449 6.1e-11 71.6 190 28.4
Asa8G06100 Allium sativum HOM05M003469 ORTHO05M000449 7.9e-11 71.2 187 29.9
Asa8G06101 Allium sativum HOM05M003469 ORTHO05M000449 7.9e-11 71.2 187 29.9
EJB05_23976 Eragrostis curvula HOM05M000589 ORTHO05M002003 7.9e-11 71.2 199 28.1
OB12G25930 Oryza brachyantha HOM05M000589 ORTHO05M002003 1.0e-10 70.9 177 27.7
Potri.001G318300 Populus trichocarpa HOM05M002220 ORTHO05M000449 1.0e-10 70.9 178 29.8
Asa8G06073 Allium sativum HOM05M003469 ORTHO05M000449 1.8e-10 70.1 190 28.9
Asa8G06076 Allium sativum HOM05M003469 ORTHO05M000449 1.8e-10 70.1 198 28.3
Asa8G06070 Allium sativum HOM05M003469 ORTHO05M000449 2.3e-10 69.7 192 29.7
Solyc05g005110.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 2.3e-10 69.7 196 27.6
Solyc09g072930.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 2.3e-10 69.7 179 28.5
OsKitaake12g214100 Oryza sativa Kitaake HOM05M000589 ORTHO05M002003 3.0e-10 69.3 189 28.0
Glyma.10G199800 Glycine max HOM05M003469 ORTHO05M000449 3.9e-10 68.9 210 24.3
Solyc02g087270.2 Solanum lycopersicum HOM05M002220 ORTHO05M000449 5.1e-10 68.6 95 42.1
Solyc12g098170.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 6.7e-10 68.2 187 26.7
Asa8G06095 Allium sativum HOM05M003469 ORTHO05M000449 8.7e-10 67.8 193 27.5
Asa8G06063 Allium sativum HOM05M003469 ORTHO05M000449 1.1e-09 67.4 187 27.8
Asa8G06066 Allium sativum HOM05M003469 ORTHO05M000449 1.1e-09 67.4 187 27.8
Asa2G03349 Allium sativum HOM05M003469 ORTHO05M000449 1.5e-09 67.0 190 28.4
Solyc09g083230.1 Solanum lycopersicum HOM05M002220 ORTHO05M000449 1.9e-09 66.6 180 25.6
Asa8G00192 Allium sativum HOM05M008547 ORTHO05M000449 4.3e-09 65.5 243 23.9
MBI17_g24693_MAGBIO Magnolia biondii HOM05M008389 ORTHO05M010043 5.7e-09 65.1 178 27.0
GWHGASIY010777 Secale cereale HOM05M000589 ORTHO05M002003 5.7e-09 65.1 188 29.3
Ot_Chr1_g11070 Oropetium thomaeum HOM05M000589 ORTHO05M002003 7.4e-09 64.7 170 29.4
Asa0G02047 Allium sativum HOM05M003469 ORTHO05M000449 9.7e-09 64.3 163 29.4
Asa8G00985 Allium sativum HOM05M008547 ORTHO05M000449 9.7e-09 64.3 182 24.7
Solyc07g150113.1 Solanum lycopersicum HOM05M003469 ORTHO05M000449 9.7e-09 64.3 77 40.3
Potri.008G216223 Populus trichocarpa HOM05M012497 ORTHO05M013406 1.6e-08 63.5 195 26.7
Potri.017G058000 Populus trichocarpa HOM05M002220 ORTHO05M000449 1.6e-08 63.5 174 28.2
evm.TU.AsparagusV1_06.1930.V1.1 Asparagus officinalis HOM05M000589 ORTHO05M001044 6.3e-08 61.6 163 28.2
Potri.001G396800 Populus trichocarpa HOM05M008389 ORTHO05M010043 6.3e-08 61.6 157 28.7
Solyc09g091220.3 Solanum lycopersicum HOM05M002220 ORTHO05M000449 6.3e-08 61.6 203 23.6
Glyma.15G115100 Glycine max HOM05M002220 ORTHO05M000449 8.2e-08 61.2 191 23.0
Solyc07g055020.3 Solanum lycopersicum HOM05M001727 ORTHO05M000449 8.2e-08 61.2 194 25.8
Asa8G00999 Allium sativum HOM05M008547 ORTHO05M000449 1.1e-07 60.8 186 26.3
Potri.001G129200 Populus trichocarpa HOM05M002220 ORTHO05M000449 1.1e-07 60.8 176 25.6
Potri.008G215800 Populus trichocarpa HOM05M002220 ORTHO05M010043 1.1e-07 60.8 185 26.5
Potri.011G137200 Populus trichocarpa HOM05M002220 ORTHO05M010043 3.1e-07 59.3 176 27.3
V3.Lp_chr1_0G2142 Lolium perenne HOM05M000589 ORTHO05M002003 4.1e-07 58.9 176 29.5
MBI14_g41393_MAGBIO Magnolia biondii HOM05M000061 ORTHO05M000449 5.3e-07 58.5 145 24.8
Asa7G05287 Allium sativum HOM05M003469 ORTHO05M000449 1.2e-06 57.4 190 26.3
Asa2G00069 Allium sativum HOM05M000589 ORTHO05M010525 1.5e-06 57.0 172 29.1
Potri.001G224200 Populus trichocarpa HOM05M001727 ORTHO05M000449 2.6e-06 56.2 181 27.1
Solyc10g017680.1 Solanum lycopersicum HOM05M003469 ORTHO05M000449 2.6e-06 56.2 130 28.5
Sobic.004G071500 Sorghum bicolor HOM05M000854 ORTHO05M000648 3.4e-06 55.8 222 24.8
V3.Lp_chr4_0G3658 Lolium perenne HOM05M000589 ORTHO05M001044 4.5e-06 55.5 190 25.3
Solyc01g008660.4 Solanum lycopersicum HOM05M002220 ORTHO05M000449 4.5e-06 55.5 200 25.0
Asa5G02870 Allium sativum HOM05M014370 ORTHO05M011290 5.9e-06 55.1 178 26.4
Asa5G03431 Allium sativum HOM05M003469 ORTHO05M000449 5.9e-06 55.1 201 24.9
Asa8G01003 Allium sativum HOM05M008547 ORTHO05M000449 7.7e-06 54.7 173 26.6

Aegilops tauschii (0 genes)
Allium sativum (19 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (1 genes)
Glycine max (3 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Magnolia biondii (3 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (1 genes)
Oryza alta (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (16 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (0 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (26 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (0 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings